Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 AC008806.1-201ENST00000624962 2443 ntBASIC11.89□□□□□ -0.51
APOC1P02654 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC11.89□□□□□ -0.51
APOC1P02654 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 SLC44A4-203ENST00000375562 2505 ntTSL 2 BASIC11.89□□□□□ -0.51
APOC1P02654 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC11.89□□□□□ -0.51
APOC1P02654 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC11.89□□□□□ -0.51
APOC1P02654 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC11.89□□□□□ -0.51
APOC1P02654 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
APOC1P02654 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
APOC1P02654 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC11.89□□□□□ -0.51
APOC1P02654 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
APOC1P02654 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC11.88□□□□□ -0.51
APOC1P02654 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
APOC1P02654 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
APOC1P02654 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 HLA-DQB1-202ENST00000399079 1501 ntBASIC11.88□□□□□ -0.51
APOC1P02654 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC11.88□□□□□ -0.51
APOC1P02654 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
APOC1P02654 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC11.88□□□□□ -0.51
APOC1P02654 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
APOC1P02654 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 ACTBP14-201ENST00000411655 1089 ntBASIC11.88□□□□□ -0.51
APOC1P02654 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC11.88□□□□□ -0.51
APOC1P02654 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC11.88□□□□□ -0.51
APOC1P02654 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC11.88□□□□□ -0.51
APOC1P02654 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC11.88□□□□□ -0.51
APOC1P02654 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC11.88□□□□□ -0.51
APOC1P02654 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC11.88□□□□□ -0.51
APOC1P02654 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC11.88□□□□□ -0.51
APOC1P02654 OR5BD1P-201ENST00000532527 817 ntBASIC11.88□□□□□ -0.51
APOC1P02654 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC11.88□□□□□ -0.51
APOC1P02654 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC11.88□□□□□ -0.51
APOC1P02654 TPM1-223ENST00000560445 485 ntTSL 3 BASIC11.88□□□□□ -0.51
APOC1P02654 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC11.88□□□□□ -0.51
APOC1P02654 MIR3619-201ENST00000579667 83 ntBASIC11.88□□□□□ -0.51
APOC1P02654 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC11.88□□□□□ -0.51
APOC1P02654 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC11.88□□□□□ -0.51
APOC1P02654 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC11.88□□□□□ -0.51
APOC1P02654 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 CU633904.3-201ENST00000624042 1029 ntBASIC11.88□□□□□ -0.51
APOC1P02654 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC11.88□□□□□ -0.51
APOC1P02654 Z82244.1-201ENST00000631502 840 ntBASIC11.88□□□□□ -0.51
APOC1P02654 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 PIGO-202ENST00000361778 2464 ntTSL 5 BASIC11.88□□□□□ -0.51
APOC1P02654 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
APOC1P02654 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
APOC1P02654 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
APOC1P02654 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC11.88□□□□□ -0.51
APOC1P02654 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC11.88□□□□□ -0.51
APOC1P02654 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC1P02654 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
APOC1P02654 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 AC237221.1-202ENST00000563054 2947 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC11.87□□□□□ -0.51
APOC1P02654 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 PER1-202ENST00000354903 3115 ntTSL 2 BASIC11.87□□□□□ -0.51
APOC1P02654 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
APOC1P02654 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
APOC1P02654 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC11.87□□□□□ -0.51
APOC1P02654 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
APOC1P02654 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
APOC1P02654 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
APOC1P02654 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC11.87□□□□□ -0.51
APOC1P02654 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms