Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 OR13C2-201ENST00000542196 957 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 AL078590.3-201ENST00000607531 750 ntTSL 3 BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 COX6B2-205ENST00000588572 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 SULT1A4-201ENST00000360423 1390 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 NDRG4-254ENST00000569923 1312 ntTSL 2 BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 NAA50-203ENST00000477813 1945 ntTSL 5 BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 RN7SKP245-201ENST00000364025 320 ntBASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 MAPT-207ENST00000420682 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 MAPT-208ENST00000431008 1233 ntTSL 5 BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 RN7SL521P-201ENST00000488398 297 ntBASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 RPLP0P2-204ENST00000490750 961 ntBASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 AP002383.2-201ENST00000545768 675 ntBASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 AC079779.3-201ENST00000588842 1200 ntTSL 5 BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 BMP4-205ENST00000558984 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 FAM98A-202ENST00000403368 2818 ntTSL 2 BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42BPAQ5VT25 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC19.21■□□□□ 0.66
CDC42BPAQ5VT25 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 AL512383.1-201ENST00000624175 2677 ntBASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 AL139156.2-201ENST00000414059 340 ntBASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 MEF2C-AS1-205ENST00000509179 388 ntTSL 5 BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 LMO3-228ENST00000541846 573 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 AL162464.2-201ENST00000557761 526 ntTSL 4 BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 MIR1587-201ENST00000583319 53 ntBASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 ZNF124-201ENST00000340684 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 C11orf1-201ENST00000260276 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 RNA5SP469-201ENST00000364165 109 ntBASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 SMIM21-201ENST00000382638 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 SUMF1-203ENST00000405420 1128 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 AC023115.1-201ENST00000450944 574 ntTSL 4 BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 AC002351.1-201ENST00000546852 590 ntTSL 2 BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 AC091588.2-201ENST00000578741 366 ntTSL 3 BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 AC012442.3-201ENST00000636053 940 ntTSL 5 BASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 AC137936.2-201ENST00000636329 620 ntBASIC19.2■□□□□ 0.66
CDC42BPAQ5VT25 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 PARPBP-210ENST00000541394 2452 ntTSL 2 BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 KRT31-201ENST00000251645 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 OR4C6-201ENST00000314259 1020 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 CFAP36-205ENST00000407816 1125 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 TRBV22-1-201ENST00000424543 337 ntBASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 RN7SL265P-201ENST00000486808 300 ntBASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 ZBED3-AS1-206ENST00000508401 582 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms