Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.27□□□□□ -0.44
RFC3P40938 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RFC3P40938 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 AL513497.1-201ENST00000624273 2083 ntBASIC12.27□□□□□ -0.45
RFC3P40938 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC12.27□□□□□ -0.45
RFC3P40938 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 HLA-DMA-202ENST00000395303 1007 ntBASIC12.27□□□□□ -0.45
RFC3P40938 AC092570.1-201ENST00000414446 469 ntBASIC12.27□□□□□ -0.45
RFC3P40938 RPSAP12-201ENST00000435879 888 ntBASIC12.27□□□□□ -0.45
RFC3P40938 ZNF877P-201ENST00000437614 612 ntBASIC12.27□□□□□ -0.45
RFC3P40938 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC12.27□□□□□ -0.45
RFC3P40938 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC12.27□□□□□ -0.45
RFC3P40938 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.45
RFC3P40938 AP000920.1-201ENST00000531824 344 ntBASIC12.27□□□□□ -0.45
RFC3P40938 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC12.27□□□□□ -0.45
RFC3P40938 MIR5091-201ENST00000578707 93 ntBASIC12.27□□□□□ -0.45
RFC3P40938 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC12.27□□□□□ -0.45
RFC3P40938 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC12.27□□□□□ -0.45
RFC3P40938 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC12.27□□□□□ -0.45
RFC3P40938 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
RFC3P40938 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.27□□□□□ -0.45
RFC3P40938 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
RFC3P40938 AL606760.3-201ENST00000569869 3591 ntBASIC12.27□□□□□ -0.45
RFC3P40938 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
RFC3P40938 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
RFC3P40938 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.27□□□□□ -0.45
RFC3P40938 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RFC3P40938 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
RFC3P40938 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
RFC3P40938 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.45
RFC3P40938 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC12.27□□□□□ -0.45
RFC3P40938 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.26□□□□□ -0.45
RFC3P40938 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RFC3P40938 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.26□□□□□ -0.45
RFC3P40938 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RFC3P40938 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
RFC3P40938 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
RFC3P40938 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.26□□□□□ -0.45
RFC3P40938 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RFC3P40938 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
RFC3P40938 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC12.26□□□□□ -0.45
RFC3P40938 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RFC3P40938 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RFC3P40938 MARK2P9-201ENST00000430958 1727 ntBASIC12.26□□□□□ -0.45
RFC3P40938 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RFC3P40938 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RFC3P40938 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RFC3P40938 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RFC3P40938 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RFC3P40938 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RFC3P40938 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RFC3P40938 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
RFC3P40938 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC12.26□□□□□ -0.45
RFC3P40938 OR7E155P-201ENST00000412208 1014 ntBASIC12.26□□□□□ -0.45
RFC3P40938 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC12.26□□□□□ -0.45
RFC3P40938 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC12.26□□□□□ -0.45
RFC3P40938 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC12.26□□□□□ -0.45
RFC3P40938 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RFC3P40938 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC12.26□□□□□ -0.45
RFC3P40938 RPL3P5-201ENST00000441645 1232 ntBASIC12.26□□□□□ -0.45
RFC3P40938 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC12.26□□□□□ -0.45
RFC3P40938 AL451000.1-201ENST00000451300 1186 ntBASIC12.26□□□□□ -0.45
RFC3P40938 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC12.26□□□□□ -0.45
RFC3P40938 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RFC3P40938 AC012158.2-201ENST00000536546 354 ntBASIC12.26□□□□□ -0.45
RFC3P40938 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC12.26□□□□□ -0.45
RFC3P40938 HNRNPA1P16-201ENST00000575692 955 ntBASIC12.26□□□□□ -0.45
RFC3P40938 MIR5001-201ENST00000580185 100 ntBASIC12.26□□□□□ -0.45
RFC3P40938 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC12.26□□□□□ -0.45
RFC3P40938 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC12.26□□□□□ -0.45
RFC3P40938 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC12.26□□□□□ -0.45
RFC3P40938 AC010531.8-201ENST00000623341 685 ntBASIC12.26□□□□□ -0.45
RFC3P40938 BX322534.1-201ENST00000635574 241 ntBASIC12.26□□□□□ -0.45
RFC3P40938 AC215524.1-201ENST00000635696 241 ntBASIC12.26□□□□□ -0.45
RFC3P40938 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC12.26□□□□□ -0.45
RFC3P40938 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC12.26□□□□□ -0.45
RFC3P40938 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC12.26□□□□□ -0.45
RFC3P40938 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
RFC3P40938 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.26□□□□□ -0.45
RFC3P40938 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
RFC3P40938 NCLP1-201ENST00000445357 1963 ntBASIC12.26□□□□□ -0.45
RFC3P40938 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms