Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 SRL-202ENST00000537996 1814 ntTSL 2 BASIC15.92■□□□□ 0.14
POLR3DP05423 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 BEND3P3-201ENST00000611030 2440 ntBASIC15.92■□□□□ 0.14
POLR3DP05423 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
POLR3DP05423 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 TUBB2BP1-201ENST00000404155 871 ntBASIC15.92■□□□□ 0.14
POLR3DP05423 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
POLR3DP05423 KRT8P30-201ENST00000432100 650 ntBASIC15.92■□□□□ 0.14
POLR3DP05423 NME6-208ENST00000435684 599 ntTSL 2 BASIC15.92■□□□□ 0.14
POLR3DP05423 RPE-208ENST00000436630 1128 ntTSL 2 BASIC15.92■□□□□ 0.14
POLR3DP05423 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC15.92■□□□□ 0.14
POLR3DP05423 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC15.92■□□□□ 0.14
POLR3DP05423 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
POLR3DP05423 RPL29P2-201ENST00000488409 460 ntBASIC15.92■□□□□ 0.14
POLR3DP05423 AC012158.2-201ENST00000536546 354 ntBASIC15.92■□□□□ 0.14
POLR3DP05423 AC010202.1-201ENST00000551181 405 ntBASIC15.92■□□□□ 0.14
POLR3DP05423 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC15.92■□□□□ 0.14
POLR3DP05423 HNRNPA1P16-201ENST00000575692 955 ntBASIC15.92■□□□□ 0.14
POLR3DP05423 AC048382.6-201ENST00000621980 1223 ntBASIC15.92■□□□□ 0.14
POLR3DP05423 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC15.92■□□□□ 0.14
POLR3DP05423 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC15.92■□□□□ 0.14
POLR3DP05423 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC15.92■□□□□ 0.14
POLR3DP05423 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
POLR3DP05423 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC15.92■□□□□ 0.14
POLR3DP05423 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
POLR3DP05423 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC15.91■□□□□ 0.14
POLR3DP05423 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC15.91■□□□□ 0.14
POLR3DP05423 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC15.91■□□□□ 0.14
POLR3DP05423 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
POLR3DP05423 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC15.91■□□□□ 0.14
POLR3DP05423 ZSCAN5DP-201ENST00000600684 1488 ntBASIC15.91■□□□□ 0.14
POLR3DP05423 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 LILRP2-202ENST00000413572 1383 ntBASIC15.91■□□□□ 0.14
POLR3DP05423 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC15.91■□□□□ 0.14
POLR3DP05423 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC15.91■□□□□ 0.14
POLR3DP05423 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC15.91■□□□□ 0.14
POLR3DP05423 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
POLR3DP05423 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
POLR3DP05423 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
POLR3DP05423 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC15.91■□□□□ 0.14
POLR3DP05423 AF274858.1-201ENST00000406288 372 ntBASIC15.91■□□□□ 0.14
POLR3DP05423 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC15.91■□□□□ 0.14
POLR3DP05423 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC15.91■□□□□ 0.14
POLR3DP05423 KRT19P4-201ENST00000443208 943 ntBASIC15.91■□□□□ 0.14
POLR3DP05423 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC15.91■□□□□ 0.14
POLR3DP05423 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC15.91■□□□□ 0.14
POLR3DP05423 MIR4746-201ENST00000579802 71 ntBASIC15.91■□□□□ 0.14
POLR3DP05423 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC15.91■□□□□ 0.14
POLR3DP05423 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC15.91■□□□□ 0.14
POLR3DP05423 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC15.91■□□□□ 0.14
POLR3DP05423 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC15.91■□□□□ 0.14
POLR3DP05423 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC15.91■□□□□ 0.14
POLR3DP05423 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
POLR3DP05423 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC15.91■□□□□ 0.14
POLR3DP05423 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC15.91■□□□□ 0.14
POLR3DP05423 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 Z97653.2-201ENST00000623057 1418 ntBASIC15.91■□□□□ 0.14
POLR3DP05423 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
POLR3DP05423 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
POLR3DP05423 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms