Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 CTAGE13P-201ENST00000416709 2446 ntBASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 PYY2-201ENST00000315776 282 ntBASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 AKR7A2P1-201ENST00000460134 915 ntBASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 AC093300.1-201ENST00000510368 1201 ntBASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 AC243960.2-201ENST00000600996 747 ntBASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
POLR2J2Q9GZM3 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
POLR2J2Q9GZM3 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
POLR2J2Q9GZM3 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC12.4□□□□□ -0.43
POLR2J2Q9GZM3 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
POLR2J2Q9GZM3 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
POLR2J2Q9GZM3 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
POLR2J2Q9GZM3 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
POLR2J2Q9GZM3 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
POLR2J2Q9GZM3 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC12.4□□□□□ -0.43
POLR2J2Q9GZM3 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
POLR2J2Q9GZM3 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 EGLN3-205ENST00000547327 2849 ntBASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 SPTLC1P5-201ENST00000450718 252 ntBASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 RN7SL11P-201ENST00000471305 293 ntBASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 ZNF767P-206ENST00000513792 565 ntBASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 AC024681.1-201ENST00000521917 487 ntBASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 IQSEC3P1-201ENST00000538799 536 ntBASIC12.39□□□□□ -0.43
POLR2J2Q9GZM3 AC138701.2-201ENST00000553634 226 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms