Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCG3Q8WXD2 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SCG3Q8WXD2 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC13.83□□□□□ -0.2
SCG3Q8WXD2 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCG3Q8WXD2 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SCG3Q8WXD2 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC13.83□□□□□ -0.2
SCG3Q8WXD2 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 CYP51A1P3-201ENST00000400072 1428 ntBASIC13.82□□□□□ -0.2
SCG3Q8WXD2 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 STX3-207ENST00000633708 3111 ntTSL 5 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 AC008040.5-201ENST00000599781 1781 ntBASIC13.82□□□□□ -0.2
SCG3Q8WXD2 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 TUBB2BP1-201ENST00000404155 871 ntBASIC13.82□□□□□ -0.2
SCG3Q8WXD2 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 AC005722.1-201ENST00000431878 964 ntBASIC13.82□□□□□ -0.2
SCG3Q8WXD2 PIN4P1-201ENST00000451079 396 ntBASIC13.82□□□□□ -0.2
SCG3Q8WXD2 RN7SL788P-201ENST00000460504 316 ntBASIC13.82□□□□□ -0.2
SCG3Q8WXD2 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 RN7SL357P-201ENST00000581065 298 ntBASIC13.82□□□□□ -0.2
SCG3Q8WXD2 MIR4326-201ENST00000582203 59 ntBASIC13.82□□□□□ -0.2
SCG3Q8WXD2 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 AC138466.5-201ENST00000624002 808 ntBASIC13.82□□□□□ -0.2
SCG3Q8WXD2 AC009145.4-201ENST00000625119 1294 ntBASIC13.82□□□□□ -0.2
SCG3Q8WXD2 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 LPO-204ENST00000543544 2350 ntTSL 2 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 AC104758.3-203ENST00000562938 2123 ntBASIC13.82□□□□□ -0.2
SCG3Q8WXD2 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCG3Q8WXD2 AC138761.6-201ENST00000583997 1423 ntBASIC13.81□□□□□ -0.2
SCG3Q8WXD2 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 AC106827.1-201ENST00000366454 431 ntBASIC13.81□□□□□ -0.2
SCG3Q8WXD2 AC003958.1-201ENST00000435883 421 ntBASIC13.81□□□□□ -0.2
SCG3Q8WXD2 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 HMGB3P14-201ENST00000494195 599 ntBASIC13.81□□□□□ -0.2
SCG3Q8WXD2 AC091917.2-201ENST00000505002 744 ntBASIC13.81□□□□□ -0.2
SCG3Q8WXD2 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 LINC00244-201ENST00000625073 613 ntBASIC13.81□□□□□ -0.2
SCG3Q8WXD2 ST5-261ENST00000626808 1071 ntTSL 5 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms