Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
PCP4P48539 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
PCP4P48539 LRRIQ4-201ENST00000340806 1827 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
PCP4P48539 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 KIAA0907-203ENST00000368321 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 PARGP1-201ENST00000417555 2286 ntBASIC8.33□□□□□ -1.08
PCP4P48539 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 TRPC3-201ENST00000264811 3675 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 GTF2H1-214ENST00000534641 2587 ntTSL 2 BASIC8.33□□□□□ -1.08
PCP4P48539 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC8.33□□□□□ -1.08
PCP4P48539 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 AC020915.6-201ENST00000637233 3042 ntAPPRIS P5 TSL 5 BASIC8.33□□□□□ -1.08
PCP4P48539 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 WDR36-206ENST00000612402 6592 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 CEP68-205ENST00000537589 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 FAM153A-223ENST00000614127 1912 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
PCP4P48539 CLEC17A-203ENST00000547437 2065 ntTSL 2 BASIC8.33□□□□□ -1.08
PCP4P48539 USP28-201ENST00000003302 4669 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 NMD3-206ENST00000472947 2378 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 NUBP1-201ENST00000283027 1228 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC8.33□□□□□ -1.08
PCP4P48539 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC8.33□□□□□ -1.08
PCP4P48539 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC8.33□□□□□ -1.08
PCP4P48539 KRT18P5-201ENST00000436075 1291 ntBASIC8.33□□□□□ -1.08
PCP4P48539 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC8.33□□□□□ -1.08
PCP4P48539 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC8.33□□□□□ -1.08
PCP4P48539 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC8.33□□□□□ -1.08
PCP4P48539 LLPH-202ENST00000446587 1177 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
PCP4P48539 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC8.33□□□□□ -1.08
PCP4P48539 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC8.33□□□□□ -1.08
PCP4P48539 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
PCP4P48539 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
PCP4P48539 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC8.33□□□□□ -1.08
PCP4P48539 GLI1-207ENST00000543426 3394 ntTSL 5 BASIC8.33□□□□□ -1.08
PCP4P48539 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC8.33□□□□□ -1.08
PCP4P48539 NFKBIA-208ENST00000557140 1400 ntTSL 5 BASIC8.33□□□□□ -1.08
PCP4P48539 AC092364.2-202ENST00000597012 1073 ntBASIC8.33□□□□□ -1.08
PCP4P48539 AC079880.1-201ENST00000603040 2046 ntBASIC8.33□□□□□ -1.08
PCP4P48539 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC8.33□□□□□ -1.08
PCP4P48539 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 WDR55-201ENST00000358337 4080 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 RNF31-211ENST00000559275 3198 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 LINC00840-201ENST00000431737 1974 ntTSL 2 BASIC8.33□□□□□ -1.08
PCP4P48539 IGSF11-204ENST00000441144 1952 ntTSL 2 BASIC8.33□□□□□ -1.08
PCP4P48539 METAP2-201ENST00000261220 1836 ntTSL 2 BASIC8.33□□□□□ -1.08
PCP4P48539 CERS2-214ENST00000561294 1803 ntTSL 5 BASIC8.33□□□□□ -1.08
PCP4P48539 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC8.33□□□□□ -1.08
PCP4P48539 CCDC32-202ENST00000416810 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 RIMKLB-213ENST00000619374 1519 ntTSL 5 BASIC8.33□□□□□ -1.08
PCP4P48539 CYP17A1-204ENST00000638190 1506 ntTSL 5 BASIC8.33□□□□□ -1.08
PCP4P48539 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC8.33□□□□□ -1.08
PCP4P48539 AC016734.2-201ENST00000624325 1377 ntBASIC8.33□□□□□ -1.08
PCP4P48539 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 TRPS1-201ENST00000220888 5480 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 GLDC-208ENST00000638661 1796 ntTSL 5 BASIC8.33□□□□□ -1.08
PCP4P48539 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 FCRL4-201ENST00000271532 3459 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 JAM2-206ENST00000480456 4337 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
PCP4P48539 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PCP4P48539 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
PCP4P48539 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
PCP4P48539 AL009178.1-201ENST00000392115 1486 ntBASIC8.32□□□□□ -1.08
PCP4P48539 ACTN4P1-201ENST00000514175 1451 ntBASIC8.32□□□□□ -1.08
PCP4P48539 CNTN2-212ENST00000638378 4447 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
PCP4P48539 METTL2B-201ENST00000262432 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PCP4P48539 WAC-204ENST00000375646 2176 ntTSL 5 BASIC8.32□□□□□ -1.08
PCP4P48539 AC093117.1-201ENST00000413541 2171 ntTSL 2 BASIC8.32□□□□□ -1.08
PCP4P48539 AP002884.3-201ENST00000504610 2749 ntTSL 2 BASIC8.32□□□□□ -1.08
PCP4P48539 Z82209.2-201ENST00000623410 2012 ntBASIC8.32□□□□□ -1.08
PCP4P48539 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PCP4P48539 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
PCP4P48539 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC8.32□□□□□ -1.08
PCP4P48539 SERPINB6-202ENST00000380520 3265 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PCP4P48539 VSNL1-201ENST00000295156 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PCP4P48539 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
PCP4P48539 SORBS1-201ENST00000277982 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
PCP4P48539 SMPD4P1-201ENST00000416717 2263 ntBASIC8.32□□□□□ -1.08
PCP4P48539 PDPN-202ENST00000376057 2801 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
PCP4P48539 TTLL6-205ENST00000433608 2548 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PCP4P48539 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PCP4P48539 NOTCH2-201ENST00000256646 11389 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PCP4P48539 SPIN4-201ENST00000374884 4117 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PCP4P48539 LPXN-201ENST00000395074 1833 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
PCP4P48539 AL160191.3-201ENST00000619152 2203 ntBASIC8.32□□□□□ -1.08
PCP4P48539 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PCP4P48539 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PCP4P48539 UBD-203ENST00000377050 1087 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PCP4P48539 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC8.32□□□□□ -1.08
PCP4P48539 AL133325.2-201ENST00000431034 449 ntTSL 2 BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms