Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 ARHGAP6-201ENST00000303025 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 NLGN3-202ENST00000374051 3913 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 PES1P2-201ENST00000449745 1735 ntBASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
RCL1Q9Y2P8 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 AC008806.1-201ENST00000624962 2443 ntBASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 NTM-206ENST00000427481 2583 ntTSL 5 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 SCN8A-215ENST00000638820 3359 ntTSL 5 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 TMEM14DP-201ENST00000422205 345 ntBASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 BX284668.4-201ENST00000453917 508 ntBASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 RPL18P13-201ENST00000478088 569 ntBASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 AC026369.2-201ENST00000540136 1101 ntTSL 3 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 BTNL10-201ENST00000595971 695 ntBASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 AL022334.2-201ENST00000610000 484 ntBASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 AC244157.2-201ENST00000616239 1006 ntBASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 CHST4-202ENST00000539698 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 SLC45A3-201ENST00000367145 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
RCL1Q9Y2P8 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 TBC1D3P5-203ENST00000586223 3083 ntTSL 2 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 NMT2-202ENST00000378165 2907 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 THUMPD3-206ENST00000452837 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 AC243964.3-201ENST00000623022 2028 ntBASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 DDO-201ENST00000368923 1953 ntTSL 2 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 ZWILCH-209ENST00000565627 1845 ntTSL 2 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 AP002008.2-201ENST00000635926 4870 ntBASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC10.96□□□□□ -0.65
RCL1Q9Y2P8 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms