Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC15.06■□□□□ 0
TPM3P06753 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC15.06■□□□□ 0
TPM3P06753 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TPM3P06753 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC15.06■□□□□ 0
TPM3P06753 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 SMCR5-201ENST00000543475 2844 ntBASIC15.06■□□□□ 0
TPM3P06753 PES1P2-201ENST00000449745 1735 ntBASIC15.06■□□□□ 0
TPM3P06753 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC15.06■□□□□ 0
TPM3P06753 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC15.05■□□□□ 0
TPM3P06753 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC15.05■□□□□ 0
TPM3P06753 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TPM3P06753 TRERF1-202ENST00000354325 4138 ntTSL 5 BASIC15.05■□□□□ 0
TPM3P06753 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TPM3P06753 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
TPM3P06753 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC15.05■□□□□ 0
TPM3P06753 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC15.05■□□□□ 0
TPM3P06753 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TPM3P06753 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC15.05■□□□□ 0
TPM3P06753 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TPM3P06753 ZNF501-201ENST00000396048 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TPM3P06753 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TPM3P06753 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TPM3P06753 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.05■□□□□ -0
TPM3P06753 AL627231.1-201ENST00000394467 1125 ntBASIC15.05■□□□□ -0
TPM3P06753 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.05■□□□□ -0
TPM3P06753 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.05■□□□□ -0
TPM3P06753 AC005076.1-201ENST00000433446 769 ntTSL 1 (best) BASIC15.05■□□□□ -0
TPM3P06753 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
TPM3P06753 Z93015.1-201ENST00000451718 390 ntBASIC15.05■□□□□ -0
TPM3P06753 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.05■□□□□ -0
TPM3P06753 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.05■□□□□ -0
TPM3P06753 DUX4L50-201ENST00000455245 715 ntBASIC15.05■□□□□ -0
TPM3P06753 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.05■□□□□ -0
TPM3P06753 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.05■□□□□ -0
TPM3P06753 SNORD3B-2-202ENST00000571722 791 ntBASIC15.05■□□□□ -0
TPM3P06753 MIR4326-201ENST00000582203 59 ntBASIC15.05■□□□□ -0
TPM3P06753 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
TPM3P06753 AL591926.3-201ENST00000611630 238 ntBASIC15.05■□□□□ -0
TPM3P06753 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC15.05■□□□□ -0
TPM3P06753 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC15.05■□□□□ -0
TPM3P06753 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TPM3P06753 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC15.05■□□□□ -0
TPM3P06753 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TPM3P06753 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC15.05■□□□□ -0
TPM3P06753 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC15.05■□□□□ -0
TPM3P06753 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TPM3P06753 TRPV1-204ENST00000425167 2607 ntTSL 1 (best) BASIC15.05■□□□□ -0
TPM3P06753 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
TPM3P06753 ZNF143-203ENST00000396602 2947 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TPM3P06753 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC15.05■□□□□ -0
TPM3P06753 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TPM3P06753 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TPM3P06753 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC15.05■□□□□ -0
TPM3P06753 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TPM3P06753 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC15.05■□□□□ -0
TPM3P06753 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC15.04■□□□□ -0
TPM3P06753 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TPM3P06753 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TPM3P06753 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC15.04■□□□□ -0
TPM3P06753 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TPM3P06753 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC15.04■□□□□ -0
TPM3P06753 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC15.04■□□□□ -0
TPM3P06753 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC15.04■□□□□ -0
TPM3P06753 STX16-202ENST00000355957 4897 ntTSL 2 BASIC15.04■□□□□ -0
TPM3P06753 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TPM3P06753 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.04■□□□□ -0
TPM3P06753 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.04■□□□□ -0
TPM3P06753 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.04■□□□□ -0
TPM3P06753 SERF2-206ENST00000409291 807 ntTSL 3 BASIC15.04■□□□□ -0
TPM3P06753 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TPM3P06753 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC15.04■□□□□ -0
TPM3P06753 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.04■□□□□ -0
TPM3P06753 ALG1L13P-202ENST00000519320 584 ntBASIC15.04■□□□□ -0
TPM3P06753 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.04■□□□□ -0
TPM3P06753 NDUFB10P1-201ENST00000567319 521 ntBASIC15.04■□□□□ -0
TPM3P06753 AC106886.1-201ENST00000568660 600 ntBASIC15.04■□□□□ -0
TPM3P06753 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TPM3P06753 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC15.04■□□□□ -0
TPM3P06753 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TPM3P06753 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TPM3P06753 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TPM3P06753 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TPM3P06753 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TPM3P06753 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TPM3P06753 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TPM3P06753 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TPM3P06753 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TPM3P06753 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TPM3P06753 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC15.03■□□□□ -0
TPM3P06753 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TPM3P06753 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TPM3P06753 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TPM3P06753 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
TPM3P06753 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TPM3P06753 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms