Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR3DP05423 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR3DP05423 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR3DP05423 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR3DP05423 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC15.98■□□□□ 0.15
POLR3DP05423 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR3DP05423 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC15.98■□□□□ 0.15
POLR3DP05423 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR3DP05423 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR3DP05423 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR3DP05423 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
POLR3DP05423 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR3DP05423 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
POLR3DP05423 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR3DP05423 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR3DP05423 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
POLR3DP05423 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
POLR3DP05423 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR3DP05423 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
POLR3DP05423 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR3DP05423 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
POLR3DP05423 CCL19-202ENST00000378800 414 ntTSL 2 BASIC15.98■□□□□ 0.15
POLR3DP05423 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
POLR3DP05423 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
POLR3DP05423 SERF2-206ENST00000409291 807 ntTSL 3 BASIC15.98■□□□□ 0.15
POLR3DP05423 SLC6A6P1-201ENST00000413933 1850 ntBASIC15.98■□□□□ 0.15
POLR3DP05423 AC092570.1-201ENST00000414446 469 ntBASIC15.98■□□□□ 0.15
POLR3DP05423 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR3DP05423 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC15.98■□□□□ 0.15
POLR3DP05423 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC15.98■□□□□ 0.15
POLR3DP05423 IFNWP2-201ENST00000431203 580 ntBASIC15.98■□□□□ 0.15
POLR3DP05423 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC15.98■□□□□ 0.15
POLR3DP05423 RPL3P5-201ENST00000441645 1232 ntBASIC15.98■□□□□ 0.15
POLR3DP05423 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC15.98■□□□□ 0.15
POLR3DP05423 AC092896.1-201ENST00000465850 380 ntBASIC15.98■□□□□ 0.15
POLR3DP05423 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC15.98■□□□□ 0.15
POLR3DP05423 RBM4-207ENST00000506523 654 ntTSL 3 BASIC15.98■□□□□ 0.15
POLR3DP05423 SRPK2P-201ENST00000523408 1100 ntBASIC15.98■□□□□ 0.15
POLR3DP05423 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC15.98■□□□□ 0.15
POLR3DP05423 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC15.98■□□□□ 0.15
POLR3DP05423 RN7SL162P-201ENST00000579233 292 ntBASIC15.98■□□□□ 0.15
POLR3DP05423 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC15.98■□□□□ 0.15
POLR3DP05423 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
POLR3DP05423 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC15.98■□□□□ 0.15
POLR3DP05423 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR3DP05423 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR3DP05423 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
POLR3DP05423 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR3DP05423 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC15.98■□□□□ 0.15
POLR3DP05423 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR3DP05423 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC15.98■□□□□ 0.15
POLR3DP05423 AC115284.2-201ENST00000624646 2054 ntBASIC15.98■□□□□ 0.15
POLR3DP05423 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
POLR3DP05423 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
POLR3DP05423 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
POLR3DP05423 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
POLR3DP05423 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
POLR3DP05423 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
POLR3DP05423 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
POLR3DP05423 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
POLR3DP05423 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
POLR3DP05423 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC15.97■□□□□ 0.15
POLR3DP05423 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
POLR3DP05423 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC15.97■□□□□ 0.15
POLR3DP05423 PGAM1P11-201ENST00000416729 680 ntBASIC15.97■□□□□ 0.15
POLR3DP05423 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC15.97■□□□□ 0.15
POLR3DP05423 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC15.97■□□□□ 0.15
POLR3DP05423 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC15.97■□□□□ 0.15
POLR3DP05423 AL118516.1-201ENST00000564152 670 ntBASIC15.97■□□□□ 0.15
POLR3DP05423 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC15.97■□□□□ 0.15
POLR3DP05423 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC15.97■□□□□ 0.15
POLR3DP05423 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC15.97■□□□□ 0.15
POLR3DP05423 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC15.97■□□□□ 0.15
POLR3DP05423 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
POLR3DP05423 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC15.97■□□□□ 0.15
POLR3DP05423 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
POLR3DP05423 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
POLR3DP05423 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
POLR3DP05423 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC15.97■□□□□ 0.15
POLR3DP05423 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
POLR3DP05423 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
POLR3DP05423 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
POLR3DP05423 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
POLR3DP05423 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
POLR3DP05423 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC15.96■□□□□ 0.15
POLR3DP05423 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
POLR3DP05423 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
POLR3DP05423 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
POLR3DP05423 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC15.96■□□□□ 0.15
POLR3DP05423 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
POLR3DP05423 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.96■□□□□ 0.15
POLR3DP05423 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
POLR3DP05423 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
POLR3DP05423 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
POLR3DP05423 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC15.96■□□□□ 0.15
POLR3DP05423 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
POLR3DP05423 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
POLR3DP05423 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
POLR3DP05423 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
POLR3DP05423 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms