Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 RPS9P1-201ENST00000419943 583 ntBASIC11.97□□□□□ -0.49
ALX3O95076 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC11.97□□□□□ -0.49
ALX3O95076 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC11.97□□□□□ -0.49
ALX3O95076 AC104073.2-201ENST00000453737 312 ntBASIC11.97□□□□□ -0.49
ALX3O95076 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC11.97□□□□□ -0.49
ALX3O95076 SLC25A15P3-201ENST00000505530 290 ntBASIC11.97□□□□□ -0.49
ALX3O95076 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC11.97□□□□□ -0.49
ALX3O95076 DERL2-202ENST00000570848 657 ntTSL 5 BASIC11.97□□□□□ -0.49
ALX3O95076 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC11.97□□□□□ -0.49
ALX3O95076 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ALX3O95076 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALX3O95076 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
ALX3O95076 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
ALX3O95076 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALX3O95076 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC11.97□□□□□ -0.49
ALX3O95076 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALX3O95076 ATF4P4-201ENST00000393544 1930 ntBASIC11.97□□□□□ -0.49
ALX3O95076 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALX3O95076 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALX3O95076 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALX3O95076 POM121L7P-201ENST00000329949 2404 ntBASIC11.97□□□□□ -0.49
ALX3O95076 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALX3O95076 TUBB8-204ENST00000564130 2438 ntTSL 5 BASIC11.97□□□□□ -0.49
ALX3O95076 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALX3O95076 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALX3O95076 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALX3O95076 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
ALX3O95076 PDE4C-206ENST00000594465 2988 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALX3O95076 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ALX3O95076 AGAP6-203ENST00000618025 2690 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
ALX3O95076 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ALX3O95076 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ALX3O95076 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC11.96□□□□□ -0.49
ALX3O95076 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
ALX3O95076 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
ALX3O95076 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ALX3O95076 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC11.96□□□□□ -0.49
ALX3O95076 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC11.96□□□□□ -0.49
ALX3O95076 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
ALX3O95076 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
ALX3O95076 ADGRD1-202ENST00000335486 2892 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ALX3O95076 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ALX3O95076 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC11.96□□□□□ -0.49
ALX3O95076 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ALX3O95076 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
ALX3O95076 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ALX3O95076 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC11.96□□□□□ -0.49
ALX3O95076 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC11.96□□□□□ -0.49
ALX3O95076 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC11.96□□□□□ -0.49
ALX3O95076 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC11.96□□□□□ -0.49
ALX3O95076 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC11.96□□□□□ -0.49
ALX3O95076 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC11.96□□□□□ -0.49
ALX3O95076 EID1-202ENST00000560490 584 ntTSL 3 BASIC11.96□□□□□ -0.49
ALX3O95076 RN7SL560P-201ENST00000577943 264 ntBASIC11.96□□□□□ -0.49
ALX3O95076 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC11.96□□□□□ -0.49
ALX3O95076 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC11.96□□□□□ -0.49
ALX3O95076 SLC18A1-201ENST00000265808 2770 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ALX3O95076 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ALX3O95076 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC11.96□□□□□ -0.49
ALX3O95076 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ALX3O95076 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
ALX3O95076 LINC01561-201ENST00000369071 2176 ntBASIC11.96□□□□□ -0.5
ALX3O95076 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC11.96□□□□□ -0.5
ALX3O95076 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC11.96□□□□□ -0.5
ALX3O95076 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
ALX3O95076 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC11.96□□□□□ -0.5
ALX3O95076 HSPA14-202ENST00000437161 1689 ntTSL 2 BASIC11.96□□□□□ -0.5
ALX3O95076 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
ALX3O95076 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
ALX3O95076 SLC3A1-202ENST00000409229 2909 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
ALX3O95076 AC020763.3-201ENST00000625095 2904 ntBASIC11.96□□□□□ -0.5
ALX3O95076 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC11.96□□□□□ -0.5
ALX3O95076 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC11.96□□□□□ -0.5
ALX3O95076 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ALX3O95076 POLA2-201ENST00000265465 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ALX3O95076 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ALX3O95076 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ALX3O95076 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALX3O95076 AC009533.1-201ENST00000539757 3158 ntBASIC11.95□□□□□ -0.5
ALX3O95076 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ALX3O95076 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALX3O95076 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC11.95□□□□□ -0.5
ALX3O95076 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALX3O95076 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
ALX3O95076 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALX3O95076 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ALX3O95076 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ALX3O95076 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ALX3O95076 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALX3O95076 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALX3O95076 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALX3O95076 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALX3O95076 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALX3O95076 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALX3O95076 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC11.95□□□□□ -0.5
ALX3O95076 AIF1L-206ENST00000372302 3340 ntTSL 2 BASIC11.95□□□□□ -0.5
ALX3O95076 MED29-207ENST00000615911 3565 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALX3O95076 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
ALX3O95076 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALX3O95076 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms