Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 NBPF17P-201ENST00000401087 2119 ntBASIC10.91□□□□□ -0.66
RAB40CQ96S21 DDX11L2-201ENST00000437401 1398 ntBASIC10.91□□□□□ -0.66
RAB40CQ96S21 ZNF221-205ENST00000622072 2102 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 KLLN-201ENST00000445946 4277 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 AMACR-201ENST00000335606 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 GK-202ENST00000378941 458 ntTSL 3 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 ATP5G2P4-201ENST00000442175 420 ntBASIC10.91□□□□□ -0.66
RAB40CQ96S21 AC005077.3-201ENST00000449614 213 ntBASIC10.91□□□□□ -0.66
RAB40CQ96S21 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 DUX4L45-201ENST00000566406 1057 ntBASIC10.91□□□□□ -0.66
RAB40CQ96S21 NDUFB10P1-201ENST00000567319 521 ntBASIC10.91□□□□□ -0.66
RAB40CQ96S21 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 MIR4741-201ENST00000579822 90 ntBASIC10.91□□□□□ -0.66
RAB40CQ96S21 EEF1DP1-201ENST00000585891 896 ntBASIC10.91□□□□□ -0.66
RAB40CQ96S21 AC010328.2-201ENST00000597698 1111 ntBASIC10.91□□□□□ -0.66
RAB40CQ96S21 AL136295.7-201ENST00000619226 1200 ntBASIC10.91□□□□□ -0.66
RAB40CQ96S21 Z82244.1-201ENST00000631502 840 ntBASIC10.91□□□□□ -0.66
RAB40CQ96S21 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 AC080013.1-204ENST00000607426 2185 ntBASIC10.91□□□□□ -0.66
RAB40CQ96S21 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB40CQ96S21 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
RAB40CQ96S21 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 G2E3-212ENST00000553504 3796 ntTSL 5 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 FPR2-203ENST00000598953 1544 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms