Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AL358215.3-201ENST00000640695 1186 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDC42BPAQ5VT25 SNX18-202ENST00000343017 3140 ntBASIC19.33■□□□□ 0.69
CDC42BPAQ5VT25 IQCB1-202ENST00000349820 1919 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDC42BPAQ5VT25 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDC42BPAQ5VT25 SPATA31C1-202ENST00000602681 1927 ntTSL 2 BASIC19.33■□□□□ 0.69
CDC42BPAQ5VT25 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDC42BPAQ5VT25 HAND2-204ENST00000621866 1337 ntTSL 5 BASIC19.33■□□□□ 0.69
CDC42BPAQ5VT25 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.69
CDC42BPAQ5VT25 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDC42BPAQ5VT25 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDC42BPAQ5VT25 COQ5-201ENST00000288532 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 ZNF215-207ENST00000610573 1503 ntTSL 5 BASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 CCDC70-201ENST00000242819 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 OOEP-201ENST00000370359 478 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 AC005838.1-201ENST00000430712 233 ntBASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 AL445933.2-201ENST00000440249 265 ntTSL 2 BASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 RN7SL681P-201ENST00000482763 292 ntBASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 AC003072.1-201ENST00000510957 612 ntBASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 CLNS1A-202ENST00000525064 1121 ntTSL 3 BASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 AC068987.2-201ENST00000565518 896 ntBASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 MXRA7-206ENST00000589082 560 ntAPPRIS ALT2 TSL 4 BASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 AC011458.2-201ENST00000603937 207 ntBASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 AL121992.3-201ENST00000606186 346 ntBASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 AC099804.1-201ENST00000623105 714 ntBASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 CARS-216ENST00000639317 135 ntTSL 5 BASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 AL513478.3-201ENST00000641038 1095 ntBASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CDC42BPAQ5VT25 PDPN-210ENST00000513143 1305 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 C19orf38-201ENST00000397820 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 C22orf15-203ENST00000402217 829 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 KCNE1-205ENST00000416357 796 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 AC022483.2-201ENST00000461464 555 ntBASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 AC079944.2-201ENST00000478867 734 ntBASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 RPSAP5-201ENST00000485258 884 ntBASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 AP005901.1-201ENST00000508721 1181 ntBASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 PTDSS1-206ENST00000522072 1112 ntTSL 2 BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 DHRS4L1-201ENST00000558293 855 ntTSL 5 BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 FAM170A-206ENST00000613773 1374 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 SPO11-201ENST00000345868 1666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 SERF1A-209ENST00000513436 1693 ntTSL 3 BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 SC5D-208ENST00000534230 1861 ntTSL 5 BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 CARS-214ENST00000529772 2637 ntTSL 2 BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 TMTC4-201ENST00000328767 2101 ntTSL 2 BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDC42BPAQ5VT25 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 CACNG1-201ENST00000226021 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 AC009237.11-201ENST00000425635 265 ntBASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 AC018892.1-201ENST00000451098 265 ntBASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 RN7SL487P-201ENST00000468140 344 ntBASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 AC010442.2-201ENST00000509301 407 ntBASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 SRP19-206ENST00000515463 660 ntTSL 3 BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 AC010531.7-201ENST00000602665 465 ntTSL 3 BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 PDLIM1P1-201ENST00000604187 969 ntBASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 NBPF13P-201ENST00000444082 1783 ntBASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 EIF3LP1-201ENST00000554099 1658 ntBASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 PIMREG-206ENST00000572595 1551 ntTSL 3 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms