Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04436 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04436 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC12.23□□□□□ -0.45
P04436 ZSCAN5DP-201ENST00000600684 1488 ntBASIC12.23□□□□□ -0.45
P04436 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.23□□□□□ -0.45
P04436 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.23□□□□□ -0.45
P04436 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04436 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04436 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04436 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
P04436 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
P04436 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC12.23□□□□□ -0.45
P04436 HNRNPA3P12-201ENST00000437410 1063 ntBASIC12.23□□□□□ -0.45
P04436 AL136084.1-201ENST00000449172 318 ntBASIC12.23□□□□□ -0.45
P04436 AC010234.1-201ENST00000494599 870 ntBASIC12.23□□□□□ -0.45
P04436 CISD2-202ENST00000503643 808 ntTSL 2 BASIC12.23□□□□□ -0.45
P04436 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04436 SLC25A51P3-201ENST00000521814 889 ntBASIC12.23□□□□□ -0.45
P04436 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC12.23□□□□□ -0.45
P04436 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04436 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC12.23□□□□□ -0.45
P04436 MDC1-209ENST00000613547 830 ntTSL 5 BASIC12.23□□□□□ -0.45
P04436 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC12.23□□□□□ -0.45
P04436 LINC00643-207ENST00000637212 734 ntBASIC12.23□□□□□ -0.45
P04436 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.23□□□□□ -0.45
P04436 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04436 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.23□□□□□ -0.45
P04436 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04436 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04436 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04436 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC12.23□□□□□ -0.45
P04436 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04436 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04436 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04436 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
P04436 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
P04436 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
P04436 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04436 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.22□□□□□ -0.45
P04436 ZNF436-AS1-201ENST00000335648 2547 ntBASIC12.22□□□□□ -0.45
P04436 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
P04436 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.22□□□□□ -0.45
P04436 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.22□□□□□ -0.45
P04436 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
P04436 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
P04436 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 AC005154.3-201ENST00000419639 1393 ntBASIC12.22□□□□□ -0.45
P04436 TUBB8P5-201ENST00000445286 1351 ntBASIC12.22□□□□□ -0.45
P04436 AC034205.3-201ENST00000603595 1376 ntBASIC12.22□□□□□ -0.45
P04436 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC12.22□□□□□ -0.45
P04436 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.22□□□□□ -0.45
P04436 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
P04436 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 MIR324-201ENST00000362183 83 ntBASIC12.22□□□□□ -0.45
P04436 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
P04436 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
P04436 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
P04436 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 AL929302.1-201ENST00000426556 871 ntBASIC12.22□□□□□ -0.45
P04436 RPL3P5-201ENST00000441645 1232 ntBASIC12.22□□□□□ -0.45
P04436 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC12.22□□□□□ -0.45
P04436 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC12.22□□□□□ -0.45
P04436 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.22□□□□□ -0.45
P04436 PHBP18-201ENST00000546648 813 ntBASIC12.22□□□□□ -0.45
P04436 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC12.22□□□□□ -0.45
P04436 AL137779.3-201ENST00000553295 729 ntBASIC12.22□□□□□ -0.45
P04436 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC12.22□□□□□ -0.45
P04436 AC091304.3-201ENST00000566500 716 ntBASIC12.22□□□□□ -0.45
P04436 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC12.22□□□□□ -0.45
P04436 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC12.22□□□□□ -0.45
P04436 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC12.22□□□□□ -0.45
P04436 GGNBP1-204ENST00000613113 887 ntBASIC12.22□□□□□ -0.45
P04436 ETV2-207ENST00000619399 994 ntTSL 5 BASIC12.22□□□□□ -0.45
P04436 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC12.22□□□□□ -0.45
P04436 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
P04436 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.22□□□□□ -0.45
P04436 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC12.22□□□□□ -0.45
P04436 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
P04436 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
P04436 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
P04436 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms