Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC11.97□□□□□ -0.49
APOC1P02654 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
APOC1P02654 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC11.97□□□□□ -0.49
APOC1P02654 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
APOC1P02654 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC11.97□□□□□ -0.49
APOC1P02654 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC11.97□□□□□ -0.49
APOC1P02654 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
APOC1P02654 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
APOC1P02654 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC11.96□□□□□ -0.49
APOC1P02654 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
APOC1P02654 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
APOC1P02654 NBN-203ENST00000409330 4523 ntTSL 5 BASIC11.96□□□□□ -0.49
APOC1P02654 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
APOC1P02654 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
APOC1P02654 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC11.96□□□□□ -0.49
APOC1P02654 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
APOC1P02654 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
APOC1P02654 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC11.96□□□□□ -0.49
APOC1P02654 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC11.96□□□□□ -0.49
APOC1P02654 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
APOC1P02654 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
APOC1P02654 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
APOC1P02654 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC11.96□□□□□ -0.49
APOC1P02654 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC11.96□□□□□ -0.49
APOC1P02654 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
APOC1P02654 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC11.96□□□□□ -0.49
APOC1P02654 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC11.96□□□□□ -0.49
APOC1P02654 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
APOC1P02654 PDXDC2P-206ENST00000534700 1315 ntBASIC11.96□□□□□ -0.49
APOC1P02654 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC11.96□□□□□ -0.49
APOC1P02654 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC11.96□□□□□ -0.49
APOC1P02654 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
APOC1P02654 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
APOC1P02654 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
APOC1P02654 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
APOC1P02654 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
APOC1P02654 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
APOC1P02654 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC11.96□□□□□ -0.49
APOC1P02654 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
APOC1P02654 MIR1247-201ENST00000408206 136 ntBASIC11.96□□□□□ -0.49
APOC1P02654 DEF8-202ENST00000418391 852 ntTSL 2 BASIC11.96□□□□□ -0.49
APOC1P02654 AL807761.2-201ENST00000422849 729 ntBASIC11.96□□□□□ -0.49
APOC1P02654 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
APOC1P02654 AC005077.3-201ENST00000449614 213 ntBASIC11.96□□□□□ -0.49
APOC1P02654 AC018638.5-201ENST00000450885 754 ntBASIC11.96□□□□□ -0.49
APOC1P02654 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC11.96□□□□□ -0.49
APOC1P02654 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
APOC1P02654 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
APOC1P02654 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC11.96□□□□□ -0.49
APOC1P02654 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC11.96□□□□□ -0.49
APOC1P02654 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC11.96□□□□□ -0.49
APOC1P02654 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC11.96□□□□□ -0.49
APOC1P02654 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC11.96□□□□□ -0.49
APOC1P02654 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC11.96□□□□□ -0.49
APOC1P02654 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
APOC1P02654 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC11.96□□□□□ -0.49
APOC1P02654 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC11.96□□□□□ -0.49
APOC1P02654 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC11.96□□□□□ -0.49
APOC1P02654 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
APOC1P02654 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
APOC1P02654 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
APOC1P02654 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
APOC1P02654 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
APOC1P02654 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
APOC1P02654 STX3-207ENST00000633708 3111 ntTSL 5 BASIC11.96□□□□□ -0.5
APOC1P02654 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
APOC1P02654 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
APOC1P02654 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
APOC1P02654 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
APOC1P02654 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
APOC1P02654 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
APOC1P02654 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
APOC1P02654 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.5
APOC1P02654 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
APOC1P02654 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC11.96□□□□□ -0.5
APOC1P02654 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
APOC1P02654 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
APOC1P02654 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
APOC1P02654 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC11.95□□□□□ -0.5
APOC1P02654 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC11.95□□□□□ -0.5
APOC1P02654 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC1P02654 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms