Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 AC023968.2-201ENST00000560593 1049 ntBASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 RN7SL605P-201ENST00000577229 281 ntBASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 APOC1-209ENST00000592885 562 ntTSL 3 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 AC026120.2-201ENST00000617239 309 ntBASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 CICP17-201ENST00000418553 2377 ntBASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 AC103563.1-201ENST00000429316 123 ntBASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 GUCY2EP-203ENST00000531117 1918 ntBASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 AC012158.2-201ENST00000536546 354 ntBASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 AL355102.3-201ENST00000554299 1678 ntBASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 AC132812.1-201ENST00000583145 892 ntBASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NPIPA3F8WFD2 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.23□□□□□ -0.45
NPIPA3F8WFD2 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPA3F8WFD2 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.23□□□□□ -0.45
NPIPA3F8WFD2 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
NPIPA3F8WFD2 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
NPIPA3F8WFD2 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPA3F8WFD2 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPA3F8WFD2 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPA3F8WFD2 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
NPIPA3F8WFD2 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
NPIPA3F8WFD2 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.23□□□□□ -0.45
NPIPA3F8WFD2 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPA3F8WFD2 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.23□□□□□ -0.45
NPIPA3F8WFD2 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms