Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 AL158201.1-201ENST00000426382 1248 ntBASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 KRBOX1-203ENST00000426937 826 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 AC097467.2-201ENST00000502884 346 ntBASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 AL138689.1-201ENST00000614612 668 ntBASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 RBP4-204ENST00000629763 838 ntTSL 5 BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 RHOXF1P3-202ENST00000639347 851 ntTSL 5 BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 AC023830.2-201ENST00000563704 1662 ntBASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 MIR200B-201ENST00000384997 95 ntBASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 IGHV4-28-201ENST00000390612 425 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 RN7SL668P-201ENST00000493933 303 ntBASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 BRD9P2-201ENST00000506203 239 ntBASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 RABGGTA-218ENST00000560777 1197 ntTSL 5 BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 AC036214.2-201ENST00000606512 917 ntBASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 CU633906.3-201ENST00000623377 741 ntBASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 AC032044.2-201ENST00000623383 186 ntBASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIMBP3Q9UFD9 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 TUBD1-205ENST00000394239 1680 ntTSL 2 BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 AL022323.5-201ENST00000624101 2059 ntBASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 RPL15P18-201ENST00000432924 612 ntBASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 AC022364.1-201ENST00000473753 739 ntTSL 5 BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 BEST3-210ENST00000551160 721 ntTSL 3 BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 BCAR1P2-201ENST00000557707 636 ntBASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 AC083801.2-201ENST00000565024 1180 ntBASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 AC117498.3-201ENST00000605409 511 ntBASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 AC242988.1-201ENST00000611044 714 ntTSL 3 BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 AC245088.2-201ENST00000634605 394 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 AC092329.4-208ENST00000640354 562 ntTSL 4 BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 CREB5-204ENST00000396300 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 MRPL48-201ENST00000310614 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIMBP3Q9UFD9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 MDM1-204ENST00000411698 2472 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 NUDT9P1-201ENST00000477230 745 ntBASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 PTPN20-219ENST00000508602 742 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 PTPN20-221ENST00000509599 945 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 PTPN20-222ENST00000509774 788 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 PTPN20-223ENST00000509900 693 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 PTPN20-226ENST00000513156 913 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 PTPN20-228ENST00000513266 818 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 HCFC1R1-206ENST00000574151 618 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 KRT16P3-204ENST00000584759 681 ntTSL 5 BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 FGFR2-223ENST00000611527 435 ntTSL 3 BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 AC023157.3-201ENST00000619086 2088 ntBASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 AC073263.2-201ENST00000624835 1863 ntBASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 CXorf40B-203ENST00000370406 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 AC026746.1-203ENST00000513386 1676 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 BCL2-203ENST00000589955 5011 ntBASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 LINC02419-201ENST00000535487 1713 ntTSL 2 BASIC19.85■□□□□ 0.77
RIMBP3Q9UFD9 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 ASAH2B-201ENST00000374006 632 ntTSL 3 BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 CCL26-202ENST00000394905 703 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIMBP3Q9UFD9 TMEM139-203ENST00000409244 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms