Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TPM3P06753 LINC00540-203ENST00000631321 2412 ntTSL 2 BASIC15.09■□□□□ 0.01
TPM3P06753 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC15.09■□□□□ 0.01
TPM3P06753 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TPM3P06753 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TPM3P06753 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TPM3P06753 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC15.09■□□□□ 0.01
TPM3P06753 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
TPM3P06753 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
TPM3P06753 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 AL031587.5-201ENST00000624344 1849 ntBASIC15.09■□□□□ 0.01
TPM3P06753 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.09■□□□□ 0.01
TPM3P06753 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TPM3P06753 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 CROCCP4-201ENST00000457096 498 ntBASIC15.09■□□□□ 0.01
TPM3P06753 CD81-209ENST00000492627 886 ntTSL 3 BASIC15.09■□□□□ 0.01
TPM3P06753 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 AC116345.2-201ENST00000512837 523 ntBASIC15.09■□□□□ 0.01
TPM3P06753 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.09■□□□□ 0.01
TPM3P06753 AC026369.2-201ENST00000540136 1101 ntTSL 3 BASIC15.09■□□□□ 0.01
TPM3P06753 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.09■□□□□ 0.01
TPM3P06753 AC005730.2-201ENST00000564549 1184 ntBASIC15.09■□□□□ 0.01
TPM3P06753 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.09■□□□□ 0.01
TPM3P06753 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.09■□□□□ 0.01
TPM3P06753 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.09■□□□□ 0.01
TPM3P06753 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.09■□□□□ 0.01
TPM3P06753 AC132825.4-202ENST00000578792 434 ntBASIC15.09■□□□□ 0.01
TPM3P06753 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.09■□□□□ 0.01
TPM3P06753 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.09■□□□□ 0.01
TPM3P06753 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.09■□□□□ 0.01
TPM3P06753 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.09■□□□□ 0.01
TPM3P06753 AC090164.2-201ENST00000611487 516 ntBASIC15.09■□□□□ 0.01
TPM3P06753 AL157813.1-201ENST00000612996 587 ntBASIC15.09■□□□□ 0.01
TPM3P06753 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
TPM3P06753 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC15.09■□□□□ 0.01
TPM3P06753 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC15.09■□□□□ 0.01
TPM3P06753 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TPM3P06753 SLC5A11-205ENST00000545376 2294 ntTSL 2 BASIC15.09■□□□□ 0.01
TPM3P06753 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC15.09■□□□□ 0.01
TPM3P06753 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TPM3P06753 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC15.08■□□□□ 0.01
TPM3P06753 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
TPM3P06753 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TPM3P06753 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TPM3P06753 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TPM3P06753 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TPM3P06753 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TPM3P06753 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TPM3P06753 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TPM3P06753 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.08■□□□□ 0
TPM3P06753 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.08■□□□□ 0
TPM3P06753 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TPM3P06753 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.08■□□□□ 0
TPM3P06753 OR8T1P-201ENST00000421347 918 ntBASIC15.08■□□□□ 0
TPM3P06753 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.08■□□□□ 0
TPM3P06753 MTX1P1-201ENST00000440904 838 ntBASIC15.08■□□□□ 0
TPM3P06753 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.08■□□□□ 0
TPM3P06753 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.08■□□□□ 0
TPM3P06753 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.08■□□□□ 0
TPM3P06753 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.08■□□□□ 0
TPM3P06753 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
TPM3P06753 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.08■□□□□ 0
TPM3P06753 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.08■□□□□ 0
TPM3P06753 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TPM3P06753 DUX4L45-201ENST00000566406 1057 ntBASIC15.08■□□□□ 0
TPM3P06753 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.08■□□□□ 0
TPM3P06753 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.08■□□□□ 0
TPM3P06753 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.08■□□□□ 0
TPM3P06753 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.08■□□□□ 0
TPM3P06753 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.08■□□□□ 0
TPM3P06753 AC004923.1-202ENST00000642106 209 ntBASIC15.08■□□□□ 0
TPM3P06753 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TPM3P06753 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TPM3P06753 AC087164.2-201ENST00000624514 3130 ntBASIC15.08■□□□□ 0
TPM3P06753 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.08■□□□□ 0
TPM3P06753 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC15.08■□□□□ 0
TPM3P06753 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TPM3P06753 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
TPM3P06753 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
TPM3P06753 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms