Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 AC027682.1-201ENST00000562846 899 ntBASIC21.73■■□□□ 1.07
DNMT3AQ9Y6K1 AC142381.2-201ENST00000566120 298 ntBASIC21.73■■□□□ 1.07
DNMT3AQ9Y6K1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.73■■□□□ 1.07
DNMT3AQ9Y6K1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
DNMT3AQ9Y6K1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DNMT3AQ9Y6K1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
DNMT3AQ9Y6K1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.72■■□□□ 1.07
DNMT3AQ9Y6K1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
DNMT3AQ9Y6K1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DNMT3AQ9Y6K1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DNMT3AQ9Y6K1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
DNMT3AQ9Y6K1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DNMT3AQ9Y6K1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DNMT3AQ9Y6K1 AC091305.1-201ENST00000479476 895 ntBASIC21.72■■□□□ 1.07
DNMT3AQ9Y6K1 AP001330.3-201ENST00000520123 633 ntBASIC21.72■■□□□ 1.07
DNMT3AQ9Y6K1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.72■■□□□ 1.07
DNMT3AQ9Y6K1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DNMT3AQ9Y6K1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DNMT3AQ9Y6K1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
DNMT3AQ9Y6K1 RASA4CP-201ENST00000424092 1398 ntBASIC21.72■■□□□ 1.07
DNMT3AQ9Y6K1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DNMT3AQ9Y6K1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
DNMT3AQ9Y6K1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
DNMT3AQ9Y6K1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.71■■□□□ 1.07
DNMT3AQ9Y6K1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.71■■□□□ 1.07
DNMT3AQ9Y6K1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.71■■□□□ 1.07
DNMT3AQ9Y6K1 AF213884.3-201ENST00000563833 479 ntBASIC21.71■■□□□ 1.07
DNMT3AQ9Y6K1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DNMT3AQ9Y6K1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DNMT3AQ9Y6K1 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.71■■□□□ 1.07
DNMT3AQ9Y6K1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DNMT3AQ9Y6K1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DNMT3AQ9Y6K1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DNMT3AQ9Y6K1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DNMT3AQ9Y6K1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.71■■□□□ 1.07
DNMT3AQ9Y6K1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
DNMT3AQ9Y6K1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DNMT3AQ9Y6K1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DNMT3AQ9Y6K1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.7■■□□□ 1.06
DNMT3AQ9Y6K1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DNMT3AQ9Y6K1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
DNMT3AQ9Y6K1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.7■■□□□ 1.06
DNMT3AQ9Y6K1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
DNMT3AQ9Y6K1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
DNMT3AQ9Y6K1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.69■■□□□ 1.06
DNMT3AQ9Y6K1 AC008764.7-201ENST00000593779 1081 ntBASIC21.69■■□□□ 1.06
DNMT3AQ9Y6K1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
DNMT3AQ9Y6K1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.69■■□□□ 1.06
DNMT3AQ9Y6K1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
DNMT3AQ9Y6K1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.69■■□□□ 1.06
DNMT3AQ9Y6K1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DNMT3AQ9Y6K1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
DNMT3AQ9Y6K1 AC004687.1-201ENST00000579003 1625 ntBASIC21.69■■□□□ 1.06
DNMT3AQ9Y6K1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
DNMT3AQ9Y6K1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
DNMT3AQ9Y6K1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.68■■□□□ 1.06
DNMT3AQ9Y6K1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DNMT3AQ9Y6K1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
DNMT3AQ9Y6K1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DNMT3AQ9Y6K1 SLC47A1P1-202ENST00000449666 945 ntBASIC21.68■■□□□ 1.06
DNMT3AQ9Y6K1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.68■■□□□ 1.06
DNMT3AQ9Y6K1 AC068587.7-201ENST00000641602 218 ntBASIC21.68■■□□□ 1.06
DNMT3AQ9Y6K1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
DNMT3AQ9Y6K1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DNMT3AQ9Y6K1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
DNMT3AQ9Y6K1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DNMT3AQ9Y6K1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.67■■□□□ 1.06
DNMT3AQ9Y6K1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DNMT3AQ9Y6K1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DNMT3AQ9Y6K1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
DNMT3AQ9Y6K1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DNMT3AQ9Y6K1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DNMT3AQ9Y6K1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
DNMT3AQ9Y6K1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.67■■□□□ 1.06
DNMT3AQ9Y6K1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.67■■□□□ 1.06
DNMT3AQ9Y6K1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DNMT3AQ9Y6K1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DNMT3AQ9Y6K1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DNMT3AQ9Y6K1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
DNMT3AQ9Y6K1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
DNMT3AQ9Y6K1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.66■■□□□ 1.06
DNMT3AQ9Y6K1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
DNMT3AQ9Y6K1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DNMT3AQ9Y6K1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.66■■□□□ 1.06
DNMT3AQ9Y6K1 AC099791.1-201ENST00000416440 715 ntBASIC21.66■■□□□ 1.06
DNMT3AQ9Y6K1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.66■■□□□ 1.06
DNMT3AQ9Y6K1 AP005435.1-201ENST00000529293 1178 ntBASIC21.66■■□□□ 1.06
DNMT3AQ9Y6K1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
DNMT3AQ9Y6K1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.66■■□□□ 1.06
DNMT3AQ9Y6K1 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.66■■□□□ 1.06
DNMT3AQ9Y6K1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
DNMT3AQ9Y6K1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.66■■□□□ 1.06
DNMT3AQ9Y6K1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DNMT3AQ9Y6K1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
DNMT3AQ9Y6K1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
DNMT3AQ9Y6K1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.65■■□□□ 1.06
DNMT3AQ9Y6K1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DNMT3AQ9Y6K1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DNMT3AQ9Y6K1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DNMT3AQ9Y6K1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms