Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHB11Q9Y5F2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.67■■□□□ 1.06
PCDHB11Q9Y5F2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB11Q9Y5F2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB11Q9Y5F2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PCDHB11Q9Y5F2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PCDHB11Q9Y5F2 AC144652.1-201ENST00000609974 1624 ntBASIC21.66■■□□□ 1.06
PCDHB11Q9Y5F2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB11Q9Y5F2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB11Q9Y5F2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHB11Q9Y5F2 AC008764.7-201ENST00000593779 1081 ntBASIC21.66■■□□□ 1.06
PCDHB11Q9Y5F2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB11Q9Y5F2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB11Q9Y5F2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB11Q9Y5F2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB11Q9Y5F2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB11Q9Y5F2 FP325331.1-202ENST00000623531 1380 ntBASIC21.65■■□□□ 1.06
PCDHB11Q9Y5F2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB11Q9Y5F2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHB11Q9Y5F2 ANOS2P-203ENST00000472227 1816 ntBASIC21.65■■□□□ 1.06
PCDHB11Q9Y5F2 AC079630.1-202ENST00000618127 1840 ntBASIC21.65■■□□□ 1.06
PCDHB11Q9Y5F2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB11Q9Y5F2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PCDHB11Q9Y5F2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB11Q9Y5F2 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.65■■□□□ 1.06
PCDHB11Q9Y5F2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PCDHB11Q9Y5F2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB11Q9Y5F2 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHB11Q9Y5F2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHB11Q9Y5F2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHB11Q9Y5F2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHB11Q9Y5F2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.64■■□□□ 1.06
PCDHB11Q9Y5F2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDHB11Q9Y5F2 IRS3P-201ENST00000223076 1006 ntBASIC21.64■■□□□ 1.05
PCDHB11Q9Y5F2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB11Q9Y5F2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDHB11Q9Y5F2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.64■■□□□ 1.05
PCDHB11Q9Y5F2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB11Q9Y5F2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDHB11Q9Y5F2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDHB11Q9Y5F2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB11Q9Y5F2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB11Q9Y5F2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB11Q9Y5F2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB11Q9Y5F2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB11Q9Y5F2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB11Q9Y5F2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHB11Q9Y5F2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PCDHB11Q9Y5F2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.63■■□□□ 1.05
PCDHB11Q9Y5F2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB11Q9Y5F2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHB11Q9Y5F2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB11Q9Y5F2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHB11Q9Y5F2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB11Q9Y5F2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PCDHB11Q9Y5F2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB11Q9Y5F2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB11Q9Y5F2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB11Q9Y5F2 AC092068.2-201ENST00000590491 1708 ntBASIC21.62■■□□□ 1.05
PCDHB11Q9Y5F2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
PCDHB11Q9Y5F2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB11Q9Y5F2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB11Q9Y5F2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PCDHB11Q9Y5F2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB11Q9Y5F2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB11Q9Y5F2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB11Q9Y5F2 AC009086.3-201ENST00000623486 1008 ntBASIC21.61■■□□□ 1.05
PCDHB11Q9Y5F2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB11Q9Y5F2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB11Q9Y5F2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB11Q9Y5F2 LINC01529-204ENST00000636474 1715 ntBASIC21.6■■□□□ 1.05
PCDHB11Q9Y5F2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB11Q9Y5F2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
PCDHB11Q9Y5F2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB11Q9Y5F2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB11Q9Y5F2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB11Q9Y5F2 AC099791.1-201ENST00000416440 715 ntBASIC21.6■■□□□ 1.05
PCDHB11Q9Y5F2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.6■■□□□ 1.05
PCDHB11Q9Y5F2 C9orf163-202ENST00000624034 2573 ntBASIC21.6■■□□□ 1.05
PCDHB11Q9Y5F2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDHB11Q9Y5F2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PCDHB11Q9Y5F2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB11Q9Y5F2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHB11Q9Y5F2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB11Q9Y5F2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB11Q9Y5F2 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB11Q9Y5F2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB11Q9Y5F2 AL162430.1-201ENST00000480705 870 ntBASIC21.59■■□□□ 1.05
PCDHB11Q9Y5F2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB11Q9Y5F2 AC087623.3-201ENST00000607047 1098 ntBASIC21.59■■□□□ 1.05
PCDHB11Q9Y5F2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB11Q9Y5F2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB11Q9Y5F2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
PCDHB11Q9Y5F2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
PCDHB11Q9Y5F2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
PCDHB11Q9Y5F2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB11Q9Y5F2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB11Q9Y5F2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB11Q9Y5F2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB11Q9Y5F2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms