Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SF3B6Q9Y3B4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SF3B6Q9Y3B4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
SF3B6Q9Y3B4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.63■□□□□ 0.73
SF3B6Q9Y3B4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
SF3B6Q9Y3B4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SF3B6Q9Y3B4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SF3B6Q9Y3B4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.63■□□□□ 0.73
SF3B6Q9Y3B4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SF3B6Q9Y3B4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SF3B6Q9Y3B4 FAM99A-202ENST00000538190 1989 ntBASIC19.63■□□□□ 0.73
SF3B6Q9Y3B4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SF3B6Q9Y3B4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SF3B6Q9Y3B4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SF3B6Q9Y3B4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SF3B6Q9Y3B4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SF3B6Q9Y3B4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SF3B6Q9Y3B4 AC010542.4-201ENST00000563151 1910 ntBASIC19.62■□□□□ 0.73
SF3B6Q9Y3B4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.62■□□□□ 0.73
SF3B6Q9Y3B4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SF3B6Q9Y3B4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SF3B6Q9Y3B4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SF3B6Q9Y3B4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SF3B6Q9Y3B4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SF3B6Q9Y3B4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SF3B6Q9Y3B4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SF3B6Q9Y3B4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
SF3B6Q9Y3B4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.61■□□□□ 0.73
SF3B6Q9Y3B4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SF3B6Q9Y3B4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SF3B6Q9Y3B4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.61■□□□□ 0.73
SF3B6Q9Y3B4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.61■□□□□ 0.73
SF3B6Q9Y3B4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SF3B6Q9Y3B4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SF3B6Q9Y3B4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SF3B6Q9Y3B4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SF3B6Q9Y3B4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SF3B6Q9Y3B4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SF3B6Q9Y3B4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SF3B6Q9Y3B4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.6■□□□□ 0.73
SF3B6Q9Y3B4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SF3B6Q9Y3B4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.6■□□□□ 0.73
SF3B6Q9Y3B4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SF3B6Q9Y3B4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.6■□□□□ 0.73
SF3B6Q9Y3B4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.6■□□□□ 0.73
SF3B6Q9Y3B4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
SF3B6Q9Y3B4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SF3B6Q9Y3B4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SF3B6Q9Y3B4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SF3B6Q9Y3B4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SF3B6Q9Y3B4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.59■□□□□ 0.73
SF3B6Q9Y3B4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.59■□□□□ 0.73
SF3B6Q9Y3B4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.59■□□□□ 0.73
SF3B6Q9Y3B4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SF3B6Q9Y3B4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.59■□□□□ 0.73
SF3B6Q9Y3B4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SF3B6Q9Y3B4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SF3B6Q9Y3B4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SF3B6Q9Y3B4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SF3B6Q9Y3B4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SF3B6Q9Y3B4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SF3B6Q9Y3B4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SF3B6Q9Y3B4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SF3B6Q9Y3B4 AC011551.1-201ENST00000614101 683 ntBASIC19.58■□□□□ 0.72
SF3B6Q9Y3B4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SF3B6Q9Y3B4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SF3B6Q9Y3B4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SF3B6Q9Y3B4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SF3B6Q9Y3B4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.58■□□□□ 0.72
SF3B6Q9Y3B4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SF3B6Q9Y3B4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.57■□□□□ 0.72
SF3B6Q9Y3B4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SF3B6Q9Y3B4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
SF3B6Q9Y3B4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.57■□□□□ 0.72
SF3B6Q9Y3B4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SF3B6Q9Y3B4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SF3B6Q9Y3B4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SF3B6Q9Y3B4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SF3B6Q9Y3B4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
SF3B6Q9Y3B4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms