Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
MRPS28Q9Y2Q9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.04■□□□□ 0.64
MRPS28Q9Y2Q9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRPS28Q9Y2Q9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRPS28Q9Y2Q9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRPS28Q9Y2Q9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
MRPS28Q9Y2Q9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MRPS28Q9Y2Q9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
MRPS28Q9Y2Q9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MRPS28Q9Y2Q9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
MRPS28Q9Y2Q9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MRPS28Q9Y2Q9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
MRPS28Q9Y2Q9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
MRPS28Q9Y2Q9 MIR4508-201ENST00000584178 70 ntBASIC19.03■□□□□ 0.64
MRPS28Q9Y2Q9 SNX5-217ENST00000606557 1087 ntBASIC19.03■□□□□ 0.64
MRPS28Q9Y2Q9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
MRPS28Q9Y2Q9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MRPS28Q9Y2Q9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
MRPS28Q9Y2Q9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
MRPS28Q9Y2Q9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MRPS28Q9Y2Q9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.03■□□□□ 0.64
MRPS28Q9Y2Q9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MRPS28Q9Y2Q9 AC139530.1-201ENST00000575312 1977 ntBASIC19.02■□□□□ 0.64
MRPS28Q9Y2Q9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MRPS28Q9Y2Q9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MRPS28Q9Y2Q9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MRPS28Q9Y2Q9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MRPS28Q9Y2Q9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MRPS28Q9Y2Q9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MRPS28Q9Y2Q9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.02■□□□□ 0.64
MRPS28Q9Y2Q9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.02■□□□□ 0.64
MRPS28Q9Y2Q9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MRPS28Q9Y2Q9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.02■□□□□ 0.64
MRPS28Q9Y2Q9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MRPS28Q9Y2Q9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MRPS28Q9Y2Q9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
MRPS28Q9Y2Q9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.02■□□□□ 0.63
MRPS28Q9Y2Q9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
MRPS28Q9Y2Q9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MRPS28Q9Y2Q9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MRPS28Q9Y2Q9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MRPS28Q9Y2Q9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MRPS28Q9Y2Q9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MRPS28Q9Y2Q9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
MRPS28Q9Y2Q9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.01■□□□□ 0.63
MRPS28Q9Y2Q9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MRPS28Q9Y2Q9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MRPS28Q9Y2Q9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MRPS28Q9Y2Q9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.01■□□□□ 0.63
MRPS28Q9Y2Q9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MRPS28Q9Y2Q9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MRPS28Q9Y2Q9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MRPS28Q9Y2Q9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MRPS28Q9Y2Q9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
MRPS28Q9Y2Q9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MRPS28Q9Y2Q9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MRPS28Q9Y2Q9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 C11orf96-202ENST00000528572 1834 ntBASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRPS28Q9Y2Q9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
MRPS28Q9Y2Q9 AC080038.3-201ENST00000623346 1952 ntBASIC18.99■□□□□ 0.63
MRPS28Q9Y2Q9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MRPS28Q9Y2Q9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MRPS28Q9Y2Q9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MRPS28Q9Y2Q9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.99■□□□□ 0.63
MRPS28Q9Y2Q9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.99■□□□□ 0.63
MRPS28Q9Y2Q9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.99■□□□□ 0.63
MRPS28Q9Y2Q9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MRPS28Q9Y2Q9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.99■□□□□ 0.63
MRPS28Q9Y2Q9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.99■□□□□ 0.63
MRPS28Q9Y2Q9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MRPS28Q9Y2Q9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.98■□□□□ 0.63
MRPS28Q9Y2Q9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MRPS28Q9Y2Q9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.98■□□□□ 0.63
MRPS28Q9Y2Q9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MRPS28Q9Y2Q9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MRPS28Q9Y2Q9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.98■□□□□ 0.63
MRPS28Q9Y2Q9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MRPS28Q9Y2Q9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MRPS28Q9Y2Q9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms