Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.93■□□□□ 0.94
LHX6Q9UPM6 RPS2P52-201ENST00000469610 820 ntBASIC20.92■□□□□ 0.94
LHX6Q9UPM6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.92■□□□□ 0.94
LHX6Q9UPM6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LHX6Q9UPM6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.92■□□□□ 0.94
LHX6Q9UPM6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LHX6Q9UPM6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.92■□□□□ 0.94
LHX6Q9UPM6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LHX6Q9UPM6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LHX6Q9UPM6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.92■□□□□ 0.94
LHX6Q9UPM6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LHX6Q9UPM6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LHX6Q9UPM6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LHX6Q9UPM6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LHX6Q9UPM6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
LHX6Q9UPM6 SLC29A4P1-201ENST00000398760 971 ntBASIC20.91■□□□□ 0.94
LHX6Q9UPM6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.91■□□□□ 0.94
LHX6Q9UPM6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.91■□□□□ 0.94
LHX6Q9UPM6 KRT18P11-201ENST00000435214 1283 ntBASIC20.91■□□□□ 0.94
LHX6Q9UPM6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.91■□□□□ 0.94
LHX6Q9UPM6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.91■□□□□ 0.94
LHX6Q9UPM6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LHX6Q9UPM6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
LHX6Q9UPM6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.91■□□□□ 0.94
LHX6Q9UPM6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.91■□□□□ 0.94
LHX6Q9UPM6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LHX6Q9UPM6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.91■□□□□ 0.94
LHX6Q9UPM6 AC004854.2-201ENST00000608450 1441 ntBASIC20.91■□□□□ 0.94
LHX6Q9UPM6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LHX6Q9UPM6 AC092803.2-201ENST00000564287 1899 ntBASIC20.9■□□□□ 0.94
LHX6Q9UPM6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LHX6Q9UPM6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LHX6Q9UPM6 PRORSD1P-201ENST00000295112 541 ntBASIC20.9■□□□□ 0.94
LHX6Q9UPM6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LHX6Q9UPM6 KRT19P1-201ENST00000405746 1186 ntBASIC20.9■□□□□ 0.94
LHX6Q9UPM6 MIR1224-201ENST00000408193 85 ntBASIC20.9■□□□□ 0.94
LHX6Q9UPM6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
LHX6Q9UPM6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.9■□□□□ 0.94
LHX6Q9UPM6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.9■□□□□ 0.94
LHX6Q9UPM6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.9■□□□□ 0.94
LHX6Q9UPM6 DUX4L4-201ENST00000566884 1269 ntBASIC20.9■□□□□ 0.94
LHX6Q9UPM6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
LHX6Q9UPM6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.9■□□□□ 0.94
LHX6Q9UPM6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.9■□□□□ 0.94
LHX6Q9UPM6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LHX6Q9UPM6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
LHX6Q9UPM6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.89■□□□□ 0.94
LHX6Q9UPM6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LHX6Q9UPM6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LHX6Q9UPM6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.89■□□□□ 0.94
LHX6Q9UPM6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LHX6Q9UPM6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
LHX6Q9UPM6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.89■□□□□ 0.93
LHX6Q9UPM6 AC105233.4-201ENST00000642045 216 ntBASIC20.89■□□□□ 0.93
LHX6Q9UPM6 AC091060.1-201ENST00000623524 1766 ntBASIC20.89■□□□□ 0.93
LHX6Q9UPM6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.89■□□□□ 0.93
LHX6Q9UPM6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LHX6Q9UPM6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.88■□□□□ 0.93
LHX6Q9UPM6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LHX6Q9UPM6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LHX6Q9UPM6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.88■□□□□ 0.93
LHX6Q9UPM6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LHX6Q9UPM6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.88■□□□□ 0.93
LHX6Q9UPM6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LHX6Q9UPM6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LHX6Q9UPM6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.88■□□□□ 0.93
LHX6Q9UPM6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.88■□□□□ 0.93
LHX6Q9UPM6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.88■□□□□ 0.93
LHX6Q9UPM6 GUSBP6-202ENST00000438529 1198 ntBASIC20.88■□□□□ 0.93
LHX6Q9UPM6 AL050303.2-201ENST00000619798 666 ntBASIC20.88■□□□□ 0.93
LHX6Q9UPM6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LHX6Q9UPM6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
LHX6Q9UPM6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LHX6Q9UPM6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LHX6Q9UPM6 AL596275.1-201ENST00000423464 877 ntBASIC20.87■□□□□ 0.93
LHX6Q9UPM6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LHX6Q9UPM6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.87■□□□□ 0.93
LHX6Q9UPM6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LHX6Q9UPM6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
LHX6Q9UPM6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LHX6Q9UPM6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LHX6Q9UPM6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LHX6Q9UPM6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.86■□□□□ 0.93
LHX6Q9UPM6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LHX6Q9UPM6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LHX6Q9UPM6 SLC7A5P2-201ENST00000553010 536 ntBASIC20.86■□□□□ 0.93
LHX6Q9UPM6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.86■□□□□ 0.93
LHX6Q9UPM6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
LHX6Q9UPM6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LHX6Q9UPM6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LHX6Q9UPM6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LHX6Q9UPM6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
LHX6Q9UPM6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.86■□□□□ 0.93
LHX6Q9UPM6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.86■□□□□ 0.93
LHX6Q9UPM6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LHX6Q9UPM6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LHX6Q9UPM6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LHX6Q9UPM6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LHX6Q9UPM6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LHX6Q9UPM6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms