Protein–RNA interactions for Protein: Q9HCN8

SDF2L1, Stromal cell-derived factor 2-like protein 1, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1Q9HCN8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDF2L1Q9HCN8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDF2L1Q9HCN8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SDF2L1Q9HCN8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDF2L1Q9HCN8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SDF2L1Q9HCN8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDF2L1Q9HCN8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDF2L1Q9HCN8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDF2L1Q9HCN8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.25■□□□□ 0.35
SDF2L1Q9HCN8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDF2L1Q9HCN8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.25■□□□□ 0.35
SDF2L1Q9HCN8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDF2L1Q9HCN8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.25■□□□□ 0.35
SDF2L1Q9HCN8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SDF2L1Q9HCN8 MIR639-201ENST00000384974 98 ntBASIC17.25■□□□□ 0.35
SDF2L1Q9HCN8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.25■□□□□ 0.35
SDF2L1Q9HCN8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.25■□□□□ 0.35
SDF2L1Q9HCN8 AC022413.1-201ENST00000624602 984 ntBASIC17.25■□□□□ 0.35
SDF2L1Q9HCN8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDF2L1Q9HCN8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDF2L1Q9HCN8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDF2L1Q9HCN8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDF2L1Q9HCN8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.25■□□□□ 0.35
SDF2L1Q9HCN8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDF2L1Q9HCN8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDF2L1Q9HCN8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDF2L1Q9HCN8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDF2L1Q9HCN8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SDF2L1Q9HCN8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.24■□□□□ 0.35
SDF2L1Q9HCN8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDF2L1Q9HCN8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDF2L1Q9HCN8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.24■□□□□ 0.35
SDF2L1Q9HCN8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDF2L1Q9HCN8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.24■□□□□ 0.35
SDF2L1Q9HCN8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SDF2L1Q9HCN8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.24■□□□□ 0.35
SDF2L1Q9HCN8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SDF2L1Q9HCN8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDF2L1Q9HCN8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.23■□□□□ 0.35
SDF2L1Q9HCN8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.23■□□□□ 0.35
SDF2L1Q9HCN8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SDF2L1Q9HCN8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.23■□□□□ 0.35
SDF2L1Q9HCN8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SDF2L1Q9HCN8 KRT18P10-201ENST00000388836 1287 ntBASIC17.23■□□□□ 0.35
SDF2L1Q9HCN8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.23■□□□□ 0.35
SDF2L1Q9HCN8 AC093536.1-201ENST00000569153 554 ntBASIC17.23■□□□□ 0.35
SDF2L1Q9HCN8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SDF2L1Q9HCN8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SDF2L1Q9HCN8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SDF2L1Q9HCN8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SDF2L1Q9HCN8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SDF2L1Q9HCN8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SDF2L1Q9HCN8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.23■□□□□ 0.35
SDF2L1Q9HCN8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SDF2L1Q9HCN8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SDF2L1Q9HCN8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.22■□□□□ 0.35
SDF2L1Q9HCN8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.22■□□□□ 0.35
SDF2L1Q9HCN8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SDF2L1Q9HCN8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SDF2L1Q9HCN8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SDF2L1Q9HCN8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
SDF2L1Q9HCN8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SDF2L1Q9HCN8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SDF2L1Q9HCN8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SDF2L1Q9HCN8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SDF2L1Q9HCN8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SDF2L1Q9HCN8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SDF2L1Q9HCN8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SDF2L1Q9HCN8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SDF2L1Q9HCN8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 LINC01521-201ENST00000504184 1943 ntBASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SDF2L1Q9HCN8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SDF2L1Q9HCN8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SDF2L1Q9HCN8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.2■□□□□ 0.34
SDF2L1Q9HCN8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.2■□□□□ 0.34
SDF2L1Q9HCN8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SDF2L1Q9HCN8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.2■□□□□ 0.34
SDF2L1Q9HCN8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SDF2L1Q9HCN8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
SDF2L1Q9HCN8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SDF2L1Q9HCN8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms