Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ATXN3LQ9H3M9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.27■■□□□ 1.32
ATXN3LQ9H3M9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ATXN3LQ9H3M9 AL358852.1-201ENST00000623174 1268 ntBASIC23.27■■□□□ 1.32
ATXN3LQ9H3M9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
ATXN3LQ9H3M9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.27■■□□□ 1.32
ATXN3LQ9H3M9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.27■■□□□ 1.32
ATXN3LQ9H3M9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ATXN3LQ9H3M9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
ATXN3LQ9H3M9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ATXN3LQ9H3M9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.27■■□□□ 1.31
ATXN3LQ9H3M9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.26■■□□□ 1.31
ATXN3LQ9H3M9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.26■■□□□ 1.31
ATXN3LQ9H3M9 YBX1P1-201ENST00000445822 960 ntBASIC23.26■■□□□ 1.31
ATXN3LQ9H3M9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ATXN3LQ9H3M9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.26■■□□□ 1.31
ATXN3LQ9H3M9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
ATXN3LQ9H3M9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.26■■□□□ 1.31
ATXN3LQ9H3M9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
ATXN3LQ9H3M9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ATXN3LQ9H3M9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.25■■□□□ 1.31
ATXN3LQ9H3M9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
ATXN3LQ9H3M9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ATXN3LQ9H3M9 AC034268.1-201ENST00000441047 882 ntBASIC23.25■■□□□ 1.31
ATXN3LQ9H3M9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ATXN3LQ9H3M9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ATXN3LQ9H3M9 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATXN3LQ9H3M9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATXN3LQ9H3M9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
ATXN3LQ9H3M9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
ATXN3LQ9H3M9 MIR6084-201ENST00000622012 110 ntBASIC23.24■■□□□ 1.31
ATXN3LQ9H3M9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATXN3LQ9H3M9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ATXN3LQ9H3M9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATXN3LQ9H3M9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATXN3LQ9H3M9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATXN3LQ9H3M9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATXN3LQ9H3M9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.24■■□□□ 1.31
ATXN3LQ9H3M9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATXN3LQ9H3M9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ATXN3LQ9H3M9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.23■■□□□ 1.31
ATXN3LQ9H3M9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATXN3LQ9H3M9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
ATXN3LQ9H3M9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATXN3LQ9H3M9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATXN3LQ9H3M9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.23■■□□□ 1.31
ATXN3LQ9H3M9 AC012414.1-201ENST00000556676 535 ntBASIC23.23■■□□□ 1.31
ATXN3LQ9H3M9 AL031602.1-201ENST00000633169 911 ntBASIC23.23■■□□□ 1.31
ATXN3LQ9H3M9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.23■■□□□ 1.31
ATXN3LQ9H3M9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
ATXN3LQ9H3M9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
ATXN3LQ9H3M9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.23■■□□□ 1.31
ATXN3LQ9H3M9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATXN3LQ9H3M9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ATXN3LQ9H3M9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
ATXN3LQ9H3M9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ATXN3LQ9H3M9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ATXN3LQ9H3M9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATXN3LQ9H3M9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.22■■□□□ 1.31
ATXN3LQ9H3M9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.22■■□□□ 1.31
ATXN3LQ9H3M9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.22■■□□□ 1.31
ATXN3LQ9H3M9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.22■■□□□ 1.31
ATXN3LQ9H3M9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATXN3LQ9H3M9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATXN3LQ9H3M9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.22■■□□□ 1.31
ATXN3LQ9H3M9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATXN3LQ9H3M9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATXN3LQ9H3M9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATXN3LQ9H3M9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.21■■□□□ 1.31
ATXN3LQ9H3M9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.21■■□□□ 1.31
ATXN3LQ9H3M9 AL354811.1-201ENST00000610286 706 ntBASIC23.21■■□□□ 1.31
ATXN3LQ9H3M9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.21■■□□□ 1.31
ATXN3LQ9H3M9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
ATXN3LQ9H3M9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.21■■□□□ 1.31
ATXN3LQ9H3M9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATXN3LQ9H3M9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.21■■□□□ 1.31
ATXN3LQ9H3M9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATXN3LQ9H3M9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATXN3LQ9H3M9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
ATXN3LQ9H3M9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATXN3LQ9H3M9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.2■■□□□ 1.3
ATXN3LQ9H3M9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.2■■□□□ 1.3
ATXN3LQ9H3M9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
ATXN3LQ9H3M9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATXN3LQ9H3M9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.2■■□□□ 1.3
ATXN3LQ9H3M9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.2■■□□□ 1.3
ATXN3LQ9H3M9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.2■■□□□ 1.3
ATXN3LQ9H3M9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
ATXN3LQ9H3M9 AC027612.3-201ENST00000413684 1047 ntBASIC23.2■■□□□ 1.3
ATXN3LQ9H3M9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.2■■□□□ 1.3
ATXN3LQ9H3M9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ATXN3LQ9H3M9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.2■■□□□ 1.3
ATXN3LQ9H3M9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATXN3LQ9H3M9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATXN3LQ9H3M9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATXN3LQ9H3M9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATXN3LQ9H3M9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATXN3LQ9H3M9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATXN3LQ9H3M9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATXN3LQ9H3M9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms