Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
VPS11Q9H270 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
VPS11Q9H270 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
VPS11Q9H270 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
VPS11Q9H270 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.23■■□□□ 1.15
VPS11Q9H270 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.23■■□□□ 1.15
VPS11Q9H270 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.23■■□□□ 1.15
VPS11Q9H270 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS11Q9H270 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
VPS11Q9H270 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.23■■□□□ 1.15
VPS11Q9H270 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS11Q9H270 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS11Q9H270 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.22■■□□□ 1.15
VPS11Q9H270 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VPS11Q9H270 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VPS11Q9H270 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.22■■□□□ 1.15
VPS11Q9H270 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.22■■□□□ 1.15
VPS11Q9H270 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
VPS11Q9H270 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VPS11Q9H270 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VPS11Q9H270 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
VPS11Q9H270 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
VPS11Q9H270 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VPS11Q9H270 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
VPS11Q9H270 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.22■■□□□ 1.15
VPS11Q9H270 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.21■■□□□ 1.15
VPS11Q9H270 AL137060.1-201ENST00000618151 2648 ntBASIC22.21■■□□□ 1.15
VPS11Q9H270 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS11Q9H270 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
VPS11Q9H270 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS11Q9H270 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS11Q9H270 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS11Q9H270 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS11Q9H270 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS11Q9H270 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
VPS11Q9H270 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS11Q9H270 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS11Q9H270 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
VPS11Q9H270 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS11Q9H270 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
VPS11Q9H270 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.2■■□□□ 1.14
VPS11Q9H270 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.2■■□□□ 1.14
VPS11Q9H270 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.2■■□□□ 1.14
VPS11Q9H270 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS11Q9H270 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS11Q9H270 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
VPS11Q9H270 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS11Q9H270 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS11Q9H270 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS11Q9H270 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS11Q9H270 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS11Q9H270 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.19■■□□□ 1.14
VPS11Q9H270 MIR4508-201ENST00000584178 70 ntBASIC22.19■■□□□ 1.14
VPS11Q9H270 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.19■■□□□ 1.14
VPS11Q9H270 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
VPS11Q9H270 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
VPS11Q9H270 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS11Q9H270 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS11Q9H270 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS11Q9H270 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS11Q9H270 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.18■■□□□ 1.14
VPS11Q9H270 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
VPS11Q9H270 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.18■■□□□ 1.14
VPS11Q9H270 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
VPS11Q9H270 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.18■■□□□ 1.14
VPS11Q9H270 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
VPS11Q9H270 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS11Q9H270 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
VPS11Q9H270 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS11Q9H270 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS11Q9H270 KRT8P33-201ENST00000508125 1423 ntBASIC22.17■■□□□ 1.14
VPS11Q9H270 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.17■■□□□ 1.14
VPS11Q9H270 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.17■■□□□ 1.14
VPS11Q9H270 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
VPS11Q9H270 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS11Q9H270 AL033527.3-201ENST00000566366 1196 ntBASIC22.17■■□□□ 1.14
VPS11Q9H270 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.17■■□□□ 1.14
VPS11Q9H270 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.17■■□□□ 1.14
VPS11Q9H270 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.17■■□□□ 1.14
VPS11Q9H270 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS11Q9H270 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS11Q9H270 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.16■■□□□ 1.14
VPS11Q9H270 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
VPS11Q9H270 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS11Q9H270 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.16■■□□□ 1.14
VPS11Q9H270 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
VPS11Q9H270 AC012354.3-201ENST00000623734 483 ntBASIC22.16■■□□□ 1.14
VPS11Q9H270 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
VPS11Q9H270 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS11Q9H270 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS11Q9H270 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.16■■□□□ 1.14
VPS11Q9H270 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS11Q9H270 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.15■■□□□ 1.14
VPS11Q9H270 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS11Q9H270 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS11Q9H270 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS11Q9H270 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS11Q9H270 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS11Q9H270 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS11Q9H270 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms