Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.06■■□□□ 1.28
RNF38Q9H0F5 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
RNF38Q9H0F5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF38Q9H0F5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.05■■□□□ 1.28
RNF38Q9H0F5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.05■■□□□ 1.28
RNF38Q9H0F5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.05■■□□□ 1.28
RNF38Q9H0F5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RNF38Q9H0F5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
RNF38Q9H0F5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF38Q9H0F5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
RNF38Q9H0F5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF38Q9H0F5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.04■■□□□ 1.28
RNF38Q9H0F5 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.04■■□□□ 1.28
RNF38Q9H0F5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF38Q9H0F5 MIR572-201ENST00000384983 95 ntBASIC23.04■■□□□ 1.28
RNF38Q9H0F5 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.04■■□□□ 1.28
RNF38Q9H0F5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
RNF38Q9H0F5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
RNF38Q9H0F5 AC004687.1-201ENST00000579003 1625 ntBASIC23.04■■□□□ 1.28
RNF38Q9H0F5 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.03■■□□□ 1.28
RNF38Q9H0F5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF38Q9H0F5 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
RNF38Q9H0F5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF38Q9H0F5 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF38Q9H0F5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF38Q9H0F5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF38Q9H0F5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RNF38Q9H0F5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.03■■□□□ 1.28
RNF38Q9H0F5 AC092666.2-201ENST00000613287 246 ntBASIC23.03■■□□□ 1.28
RNF38Q9H0F5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF38Q9H0F5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF38Q9H0F5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.03■■□□□ 1.28
RNF38Q9H0F5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF38Q9H0F5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.02■■□□□ 1.28
RNF38Q9H0F5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.02■■□□□ 1.28
RNF38Q9H0F5 AP005435.1-201ENST00000529293 1178 ntBASIC23.02■■□□□ 1.28
RNF38Q9H0F5 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RNF38Q9H0F5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
RNF38Q9H0F5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.02■■□□□ 1.28
RNF38Q9H0F5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF38Q9H0F5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF38Q9H0F5 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF38Q9H0F5 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF38Q9H0F5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
RNF38Q9H0F5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.01■■□□□ 1.27
RNF38Q9H0F5 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF38Q9H0F5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF38Q9H0F5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF38Q9H0F5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.01■■□□□ 1.27
RNF38Q9H0F5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF38Q9H0F5 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF38Q9H0F5 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23■■□□□ 1.27
RNF38Q9H0F5 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF38Q9H0F5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23■■□□□ 1.27
RNF38Q9H0F5 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23■■□□□ 1.27
RNF38Q9H0F5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF38Q9H0F5 NME4-202ENST00000382940 766 ntTSL 3 BASIC23■■□□□ 1.27
RNF38Q9H0F5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23■■□□□ 1.27
RNF38Q9H0F5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23■■□□□ 1.27
RNF38Q9H0F5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23■■□□□ 1.27
RNF38Q9H0F5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23■■□□□ 1.27
RNF38Q9H0F5 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23■■□□□ 1.27
RNF38Q9H0F5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
RNF38Q9H0F5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
RNF38Q9H0F5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF38Q9H0F5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RNF38Q9H0F5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF38Q9H0F5 AL162430.1-201ENST00000480705 870 ntBASIC22.99■■□□□ 1.27
RNF38Q9H0F5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF38Q9H0F5 MIR6084-201ENST00000622012 110 ntBASIC22.99■■□□□ 1.27
RNF38Q9H0F5 AL358852.1-201ENST00000623174 1268 ntBASIC22.99■■□□□ 1.27
RNF38Q9H0F5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
RNF38Q9H0F5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RNF38Q9H0F5 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
RNF38Q9H0F5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.99■■□□□ 1.27
RNF38Q9H0F5 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF38Q9H0F5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF38Q9H0F5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.98■■□□□ 1.27
RNF38Q9H0F5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RNF38Q9H0F5 AL031602.1-201ENST00000633169 911 ntBASIC22.98■■□□□ 1.27
RNF38Q9H0F5 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF38Q9H0F5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.98■■□□□ 1.27
RNF38Q9H0F5 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF38Q9H0F5 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF38Q9H0F5 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF38Q9H0F5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF38Q9H0F5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.97■■□□□ 1.27
RNF38Q9H0F5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.97■■□□□ 1.27
RNF38Q9H0F5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RNF38Q9H0F5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RNF38Q9H0F5 AC012414.1-201ENST00000556676 535 ntBASIC22.97■■□□□ 1.27
RNF38Q9H0F5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF38Q9H0F5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF38Q9H0F5 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF38Q9H0F5 ANOS2P-203ENST00000472227 1816 ntBASIC22.96■■□□□ 1.27
RNF38Q9H0F5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF38Q9H0F5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF38Q9H0F5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.96■■□□□ 1.27
RNF38Q9H0F5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.96■■□□□ 1.27
RNF38Q9H0F5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms