Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF4Q9BUZ4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRAF4Q9BUZ4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRAF4Q9BUZ4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAF4Q9BUZ4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF4Q9BUZ4 AC106739.1-201ENST00000617035 715 ntBASIC19.68■□□□□ 0.74
TRAF4Q9BUZ4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TRAF4Q9BUZ4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF4Q9BUZ4 AC005703.6-201ENST00000623265 1329 ntBASIC19.68■□□□□ 0.74
TRAF4Q9BUZ4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAF4Q9BUZ4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF4Q9BUZ4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF4Q9BUZ4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAF4Q9BUZ4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAF4Q9BUZ4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TRAF4Q9BUZ4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF4Q9BUZ4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRAF4Q9BUZ4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF4Q9BUZ4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.67■□□□□ 0.74
TRAF4Q9BUZ4 PBX2P1-201ENST00000493219 1291 ntBASIC19.67■□□□□ 0.74
TRAF4Q9BUZ4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF4Q9BUZ4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF4Q9BUZ4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF4Q9BUZ4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.67■□□□□ 0.74
TRAF4Q9BUZ4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF4Q9BUZ4 RNF165-205ENST00000588679 2904 ntBASIC19.67■□□□□ 0.74
TRAF4Q9BUZ4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAF4Q9BUZ4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF4Q9BUZ4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF4Q9BUZ4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TRAF4Q9BUZ4 SLC6A10P-202ENST00000431994 2058 ntBASIC19.66■□□□□ 0.74
TRAF4Q9BUZ4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF4Q9BUZ4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF4Q9BUZ4 UNC93B3-201ENST00000308076 687 ntBASIC19.66■□□□□ 0.74
TRAF4Q9BUZ4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRAF4Q9BUZ4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF4Q9BUZ4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF4Q9BUZ4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF4Q9BUZ4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAF4Q9BUZ4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRAF4Q9BUZ4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF4Q9BUZ4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF4Q9BUZ4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF4Q9BUZ4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF4Q9BUZ4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAF4Q9BUZ4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TRAF4Q9BUZ4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAF4Q9BUZ4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRAF4Q9BUZ4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF4Q9BUZ4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
TRAF4Q9BUZ4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.64■□□□□ 0.74
TRAF4Q9BUZ4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRAF4Q9BUZ4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRAF4Q9BUZ4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF4Q9BUZ4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAF4Q9BUZ4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAF4Q9BUZ4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAF4Q9BUZ4 MIR6089-201ENST00000616698 64 ntBASIC19.64■□□□□ 0.73
TRAF4Q9BUZ4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAF4Q9BUZ4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAF4Q9BUZ4 AC131274.2-201ENST00000580697 1507 ntBASIC19.64■□□□□ 0.73
TRAF4Q9BUZ4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF4Q9BUZ4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAF4Q9BUZ4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF4Q9BUZ4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF4Q9BUZ4 AL137060.1-201ENST00000618151 2648 ntBASIC19.64■□□□□ 0.73
TRAF4Q9BUZ4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TRAF4Q9BUZ4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRAF4Q9BUZ4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF4Q9BUZ4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF4Q9BUZ4 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAF4Q9BUZ4 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAF4Q9BUZ4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF4Q9BUZ4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAF4Q9BUZ4 AL136162.1-201ENST00000607711 1078 ntBASIC19.63■□□□□ 0.73
TRAF4Q9BUZ4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TRAF4Q9BUZ4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TRAF4Q9BUZ4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAF4Q9BUZ4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF4Q9BUZ4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF4Q9BUZ4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF4Q9BUZ4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TRAF4Q9BUZ4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF4Q9BUZ4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRAF4Q9BUZ4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF4Q9BUZ4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF4Q9BUZ4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAF4Q9BUZ4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TRAF4Q9BUZ4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF4Q9BUZ4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF4Q9BUZ4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF4Q9BUZ4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF4Q9BUZ4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF4Q9BUZ4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF4Q9BUZ4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF4Q9BUZ4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF4Q9BUZ4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAF4Q9BUZ4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF4Q9BUZ4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF4Q9BUZ4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms