Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 DUSP8P5-201ENST00000422884 1815 ntBASIC13.07□□□□□ -0.32
LIMD2Q9BT23 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 TK2-202ENST00000417693 1046 ntTSL 2 BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 EI24-213ENST00000618552 1747 ntTSL 5 BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 AC103834.1-201ENST00000520383 144 ntBASIC13.06□□□□□ -0.32
LIMD2Q9BT23 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 C1orf229-201ENST00000623686 2258 ntBASIC13.06□□□□□ -0.32
LIMD2Q9BT23 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 EI24-204ENST00000527235 1625 ntTSL 5 BASIC13.06□□□□□ -0.32
LIMD2Q9BT23 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC13.05□□□□□ -0.32
LIMD2Q9BT23 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 AL117328.2-201ENST00000624617 1940 ntBASIC13.04□□□□□ -0.32
LIMD2Q9BT23 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 Z92544.1-202ENST00000571933 1220 ntBASIC13.04□□□□□ -0.32
LIMD2Q9BT23 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 REST-206ENST00000612429 1376 ntTSL 5 BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 REST-207ENST00000616975 1370 ntTSL 5 BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
LIMD2Q9BT23 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms