Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.8■□□□□ 0.92
TUBA1CQ9BQE3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TUBA1CQ9BQE3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.8■□□□□ 0.92
TUBA1CQ9BQE3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.8■□□□□ 0.92
TUBA1CQ9BQE3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.8■□□□□ 0.92
TUBA1CQ9BQE3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TUBA1CQ9BQE3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
TUBA1CQ9BQE3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TUBA1CQ9BQE3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TUBA1CQ9BQE3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TUBA1CQ9BQE3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TUBA1CQ9BQE3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.79■□□□□ 0.92
TUBA1CQ9BQE3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TUBA1CQ9BQE3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.79■□□□□ 0.92
TUBA1CQ9BQE3 SNX5-217ENST00000606557 1087 ntBASIC20.79■□□□□ 0.92
TUBA1CQ9BQE3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.79■□□□□ 0.92
TUBA1CQ9BQE3 MIR6724-1-201ENST00000616420 92 ntBASIC20.79■□□□□ 0.92
TUBA1CQ9BQE3 MIR6724-2-201ENST00000616483 92 ntBASIC20.79■□□□□ 0.92
TUBA1CQ9BQE3 MIR6724-4-201ENST00000617390 92 ntBASIC20.79■□□□□ 0.92
TUBA1CQ9BQE3 MIR6724-3-201ENST00000622482 92 ntBASIC20.79■□□□□ 0.92
TUBA1CQ9BQE3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TUBA1CQ9BQE3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TUBA1CQ9BQE3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TUBA1CQ9BQE3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.79■□□□□ 0.92
TUBA1CQ9BQE3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TUBA1CQ9BQE3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TUBA1CQ9BQE3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TUBA1CQ9BQE3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TUBA1CQ9BQE3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TUBA1CQ9BQE3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.78■□□□□ 0.92
TUBA1CQ9BQE3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.78■□□□□ 0.92
TUBA1CQ9BQE3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.78■□□□□ 0.92
TUBA1CQ9BQE3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TUBA1CQ9BQE3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TUBA1CQ9BQE3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TUBA1CQ9BQE3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TUBA1CQ9BQE3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TUBA1CQ9BQE3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TUBA1CQ9BQE3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TUBA1CQ9BQE3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TUBA1CQ9BQE3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TUBA1CQ9BQE3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.77■□□□□ 0.92
TUBA1CQ9BQE3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TUBA1CQ9BQE3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TUBA1CQ9BQE3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TUBA1CQ9BQE3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TUBA1CQ9BQE3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TUBA1CQ9BQE3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.77■□□□□ 0.92
TUBA1CQ9BQE3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TUBA1CQ9BQE3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TUBA1CQ9BQE3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TUBA1CQ9BQE3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TUBA1CQ9BQE3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TUBA1CQ9BQE3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.76■□□□□ 0.91
TUBA1CQ9BQE3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.76■□□□□ 0.91
TUBA1CQ9BQE3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TUBA1CQ9BQE3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.76■□□□□ 0.91
TUBA1CQ9BQE3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TUBA1CQ9BQE3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.75■□□□□ 0.91
TUBA1CQ9BQE3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.75■□□□□ 0.91
TUBA1CQ9BQE3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TUBA1CQ9BQE3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.75■□□□□ 0.91
TUBA1CQ9BQE3 AC008406.3-201ENST00000620001 1374 ntBASIC20.75■□□□□ 0.91
TUBA1CQ9BQE3 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.75■□□□□ 0.91
TUBA1CQ9BQE3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.75■□□□□ 0.91
TUBA1CQ9BQE3 AL117332.1-201ENST00000622628 974 ntBASIC20.75■□□□□ 0.91
TUBA1CQ9BQE3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TUBA1CQ9BQE3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.75■□□□□ 0.91
TUBA1CQ9BQE3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
TUBA1CQ9BQE3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TUBA1CQ9BQE3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TUBA1CQ9BQE3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TUBA1CQ9BQE3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
TUBA1CQ9BQE3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.74■□□□□ 0.91
TUBA1CQ9BQE3 ESRRAP2-201ENST00000418437 1549 ntBASIC20.74■□□□□ 0.91
TUBA1CQ9BQE3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TUBA1CQ9BQE3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.74■□□□□ 0.91
TUBA1CQ9BQE3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.74■□□□□ 0.91
TUBA1CQ9BQE3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.74■□□□□ 0.91
TUBA1CQ9BQE3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TUBA1CQ9BQE3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
TUBA1CQ9BQE3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.74■□□□□ 0.91
TUBA1CQ9BQE3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBA1CQ9BQE3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TUBA1CQ9BQE3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.73■□□□□ 0.91
TUBA1CQ9BQE3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TUBA1CQ9BQE3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TUBA1CQ9BQE3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBA1CQ9BQE3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TUBA1CQ9BQE3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBA1CQ9BQE3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.73■□□□□ 0.91
TUBA1CQ9BQE3 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.73■□□□□ 0.91
TUBA1CQ9BQE3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.73■□□□□ 0.91
TUBA1CQ9BQE3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.73■□□□□ 0.91
TUBA1CQ9BQE3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBA1CQ9BQE3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
TUBA1CQ9BQE3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBA1CQ9BQE3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
TUBA1CQ9BQE3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TUBA1CQ9BQE3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms