Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.53■□□□□ 0.56
CCL13Q99616 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL13Q99616 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL13Q99616 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL13Q99616 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL13Q99616 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCL13Q99616 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCL13Q99616 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCL13Q99616 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCL13Q99616 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCL13Q99616 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.52■□□□□ 0.56
CCL13Q99616 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CCL13Q99616 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CCL13Q99616 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.52■□□□□ 0.56
CCL13Q99616 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCL13Q99616 C9orf163-202ENST00000624034 2573 ntBASIC18.52■□□□□ 0.56
CCL13Q99616 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.52■□□□□ 0.55
CCL13Q99616 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCL13Q99616 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
CCL13Q99616 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCL13Q99616 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCL13Q99616 AC133637.1-201ENST00000624115 1537 ntBASIC18.51■□□□□ 0.55
CCL13Q99616 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCL13Q99616 PBX2P1-201ENST00000493219 1291 ntBASIC18.51■□□□□ 0.55
CCL13Q99616 AC004687.1-201ENST00000579003 1625 ntBASIC18.51■□□□□ 0.55
CCL13Q99616 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
CCL13Q99616 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCL13Q99616 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.51■□□□□ 0.55
CCL13Q99616 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCL13Q99616 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.51■□□□□ 0.55
CCL13Q99616 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCL13Q99616 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCL13Q99616 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCL13Q99616 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCL13Q99616 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.5■□□□□ 0.55
CCL13Q99616 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCL13Q99616 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCL13Q99616 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCL13Q99616 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCL13Q99616 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCL13Q99616 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCL13Q99616 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.5■□□□□ 0.55
CCL13Q99616 AC024257.2-201ENST00000549699 147 ntBASIC18.5■□□□□ 0.55
CCL13Q99616 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCL13Q99616 AL138724.1-201ENST00000606771 1088 ntBASIC18.5■□□□□ 0.55
CCL13Q99616 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCL13Q99616 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.5■□□□□ 0.55
CCL13Q99616 AC110285.6-201ENST00000617652 491 ntBASIC18.5■□□□□ 0.55
CCL13Q99616 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCL13Q99616 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
CCL13Q99616 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.5■□□□□ 0.55
CCL13Q99616 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCL13Q99616 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.49■□□□□ 0.55
CCL13Q99616 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCL13Q99616 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCL13Q99616 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCL13Q99616 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCL13Q99616 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.49■□□□□ 0.55
CCL13Q99616 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.49■□□□□ 0.55
CCL13Q99616 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.49■□□□□ 0.55
CCL13Q99616 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCL13Q99616 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCL13Q99616 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCL13Q99616 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCL13Q99616 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCL13Q99616 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCL13Q99616 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CCL13Q99616 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCL13Q99616 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.49■□□□□ 0.55
CCL13Q99616 AC135279.3-201ENST00000610945 1311 ntBASIC18.49■□□□□ 0.55
CCL13Q99616 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCL13Q99616 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCL13Q99616 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.48■□□□□ 0.55
CCL13Q99616 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.48■□□□□ 0.55
CCL13Q99616 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.48■□□□□ 0.55
CCL13Q99616 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCL13Q99616 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCL13Q99616 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.48■□□□□ 0.55
CCL13Q99616 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.48■□□□□ 0.55
CCL13Q99616 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.48■□□□□ 0.55
CCL13Q99616 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.48■□□□□ 0.55
CCL13Q99616 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCL13Q99616 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.48■□□□□ 0.55
CCL13Q99616 AC011298.3-201ENST00000615796 283 ntBASIC18.48■□□□□ 0.55
CCL13Q99616 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CCL13Q99616 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCL13Q99616 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCL13Q99616 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCL13Q99616 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.48■□□□□ 0.55
CCL13Q99616 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCL13Q99616 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCL13Q99616 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.47■□□□□ 0.55
CCL13Q99616 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CCL13Q99616 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCL13Q99616 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCL13Q99616 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.47■□□□□ 0.55
CCL13Q99616 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.47■□□□□ 0.55
CCL13Q99616 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.47■□□□□ 0.55
CCL13Q99616 AL139246.5-201ENST00000606645 996 ntBASIC18.47■□□□□ 0.55
CCL13Q99616 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms