Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.79■□□□□ 0.44
RITA1Q96K30 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.79■□□□□ 0.44
RITA1Q96K30 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RITA1Q96K30 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RITA1Q96K30 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RITA1Q96K30 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.79■□□□□ 0.44
RITA1Q96K30 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RITA1Q96K30 AC131281.2-201ENST00000520478 145 ntBASIC17.79■□□□□ 0.44
RITA1Q96K30 AC131212.1-201ENST00000613771 668 ntBASIC17.79■□□□□ 0.44
RITA1Q96K30 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RITA1Q96K30 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RITA1Q96K30 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RITA1Q96K30 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RITA1Q96K30 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
RITA1Q96K30 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RITA1Q96K30 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RITA1Q96K30 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RITA1Q96K30 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RITA1Q96K30 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
RITA1Q96K30 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RITA1Q96K30 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RITA1Q96K30 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.78■□□□□ 0.44
RITA1Q96K30 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RITA1Q96K30 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RITA1Q96K30 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
RITA1Q96K30 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.78■□□□□ 0.44
RITA1Q96K30 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RITA1Q96K30 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RITA1Q96K30 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.78■□□□□ 0.44
RITA1Q96K30 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RITA1Q96K30 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RITA1Q96K30 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RITA1Q96K30 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RITA1Q96K30 AC004687.1-201ENST00000579003 1625 ntBASIC17.78■□□□□ 0.44
RITA1Q96K30 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RITA1Q96K30 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RITA1Q96K30 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.78■□□□□ 0.44
RITA1Q96K30 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RITA1Q96K30 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.78■□□□□ 0.44
RITA1Q96K30 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RITA1Q96K30 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RITA1Q96K30 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RITA1Q96K30 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.77■□□□□ 0.44
RITA1Q96K30 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RITA1Q96K30 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RITA1Q96K30 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RITA1Q96K30 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RITA1Q96K30 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.77■□□□□ 0.44
RITA1Q96K30 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.77■□□□□ 0.44
RITA1Q96K30 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RITA1Q96K30 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.77■□□□□ 0.44
RITA1Q96K30 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.77■□□□□ 0.43
RITA1Q96K30 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RITA1Q96K30 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RITA1Q96K30 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RITA1Q96K30 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RITA1Q96K30 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RITA1Q96K30 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RITA1Q96K30 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RITA1Q96K30 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RITA1Q96K30 SRD5A1P1-201ENST00000442297 786 ntBASIC17.76■□□□□ 0.43
RITA1Q96K30 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.76■□□□□ 0.43
RITA1Q96K30 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.76■□□□□ 0.43
RITA1Q96K30 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.76■□□□□ 0.43
RITA1Q96K30 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RITA1Q96K30 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.76■□□□□ 0.43
RITA1Q96K30 AC009086.3-201ENST00000623486 1008 ntBASIC17.76■□□□□ 0.43
RITA1Q96K30 AC241377.3-202ENST00000626088 1088 ntBASIC17.76■□□□□ 0.43
RITA1Q96K30 AC241585.3-202ENST00000628937 1088 ntBASIC17.76■□□□□ 0.43
RITA1Q96K30 AC245100.8-202ENST00000629247 1058 ntBASIC17.76■□□□□ 0.43
RITA1Q96K30 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RITA1Q96K30 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RITA1Q96K30 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RITA1Q96K30 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RITA1Q96K30 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RITA1Q96K30 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
RITA1Q96K30 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RITA1Q96K30 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RITA1Q96K30 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RITA1Q96K30 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.75■□□□□ 0.43
RITA1Q96K30 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
RITA1Q96K30 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.75■□□□□ 0.43
RITA1Q96K30 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RITA1Q96K30 pRNA.6-201ENST00000610482 90 ntBASIC17.75■□□□□ 0.43
RITA1Q96K30 pRNA.5-201ENST00000612139 90 ntBASIC17.75■□□□□ 0.43
RITA1Q96K30 pRNA.11-201ENST00000618423 90 ntBASIC17.75■□□□□ 0.43
RITA1Q96K30 pRNA.13-201ENST00000619112 90 ntBASIC17.75■□□□□ 0.43
RITA1Q96K30 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RITA1Q96K30 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RITA1Q96K30 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RITA1Q96K30 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RITA1Q96K30 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RITA1Q96K30 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RITA1Q96K30 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RITA1Q96K30 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RITA1Q96K30 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RITA1Q96K30 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.74■□□□□ 0.43
RITA1Q96K30 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RITA1Q96K30 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
RITA1Q96K30 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms