Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF31Q96EP0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF31Q96EP0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF31Q96EP0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RNF31Q96EP0 AC141586.4-201ENST00000624558 1573 ntBASIC21.27■■□□□ 1
RNF31Q96EP0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF31Q96EP0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF31Q96EP0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF31Q96EP0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.27■■□□□ 1
RNF31Q96EP0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.27■■□□□ 1
RNF31Q96EP0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF31Q96EP0 AL031602.1-201ENST00000633169 911 ntBASIC21.27■■□□□ 1
RNF31Q96EP0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
RNF31Q96EP0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RNF31Q96EP0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF31Q96EP0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF31Q96EP0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.26■□□□□ 0.99
RNF31Q96EP0 AC104564.3-201ENST00000582367 638 ntBASIC21.26■□□□□ 0.99
RNF31Q96EP0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RNF31Q96EP0 MIR6821-201ENST00000617625 74 ntBASIC21.26■□□□□ 0.99
RNF31Q96EP0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF31Q96EP0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF31Q96EP0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RNF31Q96EP0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF31Q96EP0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF31Q96EP0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF31Q96EP0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF31Q96EP0 AC097381.1-201ENST00000429019 1296 ntBASIC21.25■□□□□ 0.99
RNF31Q96EP0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.25■□□□□ 0.99
RNF31Q96EP0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF31Q96EP0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.25■□□□□ 0.99
RNF31Q96EP0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.25■□□□□ 0.99
RNF31Q96EP0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RNF31Q96EP0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF31Q96EP0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF31Q96EP0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF31Q96EP0 AC133637.1-201ENST00000624115 1537 ntBASIC21.24■□□□□ 0.99
RNF31Q96EP0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF31Q96EP0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
RNF31Q96EP0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF31Q96EP0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
RNF31Q96EP0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF31Q96EP0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF31Q96EP0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF31Q96EP0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF31Q96EP0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF31Q96EP0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF31Q96EP0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF31Q96EP0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF31Q96EP0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF31Q96EP0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF31Q96EP0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF31Q96EP0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF31Q96EP0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF31Q96EP0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF31Q96EP0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF31Q96EP0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF31Q96EP0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RNF31Q96EP0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF31Q96EP0 AL139125.2-201ENST00000623134 1869 ntBASIC21.22■□□□□ 0.99
RNF31Q96EP0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF31Q96EP0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF31Q96EP0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF31Q96EP0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RNF31Q96EP0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF31Q96EP0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
RNF31Q96EP0 CLDN5-201ENST00000403084 2357 ntBASIC21.22■□□□□ 0.99
RNF31Q96EP0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF31Q96EP0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF31Q96EP0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF31Q96EP0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF31Q96EP0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF31Q96EP0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF31Q96EP0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RNF31Q96EP0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.21■□□□□ 0.99
RNF31Q96EP0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF31Q96EP0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.21■□□□□ 0.99
RNF31Q96EP0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF31Q96EP0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF31Q96EP0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF31Q96EP0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RNF31Q96EP0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF31Q96EP0 AC068473.5-201ENST00000616428 2072 ntBASIC21.2■□□□□ 0.99
RNF31Q96EP0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF31Q96EP0 LINC00543-201ENST00000567234 1845 ntBASIC21.2■□□□□ 0.98
RNF31Q96EP0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF31Q96EP0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF31Q96EP0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF31Q96EP0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF31Q96EP0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF31Q96EP0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.2■□□□□ 0.98
RNF31Q96EP0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF31Q96EP0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF31Q96EP0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF31Q96EP0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RNF31Q96EP0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF31Q96EP0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.19■□□□□ 0.98
RNF31Q96EP0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF31Q96EP0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF31Q96EP0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms