Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ECHDC3Q96DC8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.26■■□□□ 1.15
ECHDC3Q96DC8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ECHDC3Q96DC8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
ECHDC3Q96DC8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
ECHDC3Q96DC8 RASA4CP-201ENST00000424092 1398 ntBASIC22.25■■□□□ 1.15
ECHDC3Q96DC8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ECHDC3Q96DC8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ECHDC3Q96DC8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
ECHDC3Q96DC8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
ECHDC3Q96DC8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.25■■□□□ 1.15
ECHDC3Q96DC8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
ECHDC3Q96DC8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ECHDC3Q96DC8 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.25■■□□□ 1.15
ECHDC3Q96DC8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.25■■□□□ 1.15
ECHDC3Q96DC8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ECHDC3Q96DC8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.25■■□□□ 1.15
ECHDC3Q96DC8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ECHDC3Q96DC8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
ECHDC3Q96DC8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ECHDC3Q96DC8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ECHDC3Q96DC8 AC004687.1-201ENST00000579003 1625 ntBASIC22.24■■□□□ 1.15
ECHDC3Q96DC8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
ECHDC3Q96DC8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
ECHDC3Q96DC8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.24■■□□□ 1.15
ECHDC3Q96DC8 AC008764.7-201ENST00000593779 1081 ntBASIC22.24■■□□□ 1.15
ECHDC3Q96DC8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ECHDC3Q96DC8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
ECHDC3Q96DC8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.24■■□□□ 1.15
ECHDC3Q96DC8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ECHDC3Q96DC8 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.23■■□□□ 1.15
ECHDC3Q96DC8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ECHDC3Q96DC8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ECHDC3Q96DC8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ECHDC3Q96DC8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.23■■□□□ 1.15
ECHDC3Q96DC8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
ECHDC3Q96DC8 AC099791.1-201ENST00000416440 715 ntBASIC22.23■■□□□ 1.15
ECHDC3Q96DC8 AC010525.1-201ENST00000585559 441 ntBASIC22.23■■□□□ 1.15
ECHDC3Q96DC8 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.23■■□□□ 1.15
ECHDC3Q96DC8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ECHDC3Q96DC8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
ECHDC3Q96DC8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ECHDC3Q96DC8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ECHDC3Q96DC8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
ECHDC3Q96DC8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ECHDC3Q96DC8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.22■■□□□ 1.15
ECHDC3Q96DC8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ECHDC3Q96DC8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ECHDC3Q96DC8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ECHDC3Q96DC8 CA15P2-201ENST00000611168 834 ntBASIC22.22■■□□□ 1.15
ECHDC3Q96DC8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
ECHDC3Q96DC8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
ECHDC3Q96DC8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
ECHDC3Q96DC8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.21■■□□□ 1.15
ECHDC3Q96DC8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
ECHDC3Q96DC8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.21■■□□□ 1.15
ECHDC3Q96DC8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.21■■□□□ 1.15
ECHDC3Q96DC8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ECHDC3Q96DC8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.21■■□□□ 1.15
ECHDC3Q96DC8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ECHDC3Q96DC8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ECHDC3Q96DC8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.2■■□□□ 1.15
ECHDC3Q96DC8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ECHDC3Q96DC8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ECHDC3Q96DC8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ECHDC3Q96DC8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
ECHDC3Q96DC8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
ECHDC3Q96DC8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.19■■□□□ 1.14
ECHDC3Q96DC8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ECHDC3Q96DC8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ECHDC3Q96DC8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.19■■□□□ 1.14
ECHDC3Q96DC8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.19■■□□□ 1.14
ECHDC3Q96DC8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
ECHDC3Q96DC8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.19■■□□□ 1.14
ECHDC3Q96DC8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
ECHDC3Q96DC8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ECHDC3Q96DC8 DUSP8P5-201ENST00000422884 1815 ntBASIC22.19■■□□□ 1.14
ECHDC3Q96DC8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.19■■□□□ 1.14
ECHDC3Q96DC8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ECHDC3Q96DC8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ECHDC3Q96DC8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ECHDC3Q96DC8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ECHDC3Q96DC8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
ECHDC3Q96DC8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ECHDC3Q96DC8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
ECHDC3Q96DC8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.18■■□□□ 1.14
ECHDC3Q96DC8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.18■■□□□ 1.14
ECHDC3Q96DC8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
ECHDC3Q96DC8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ECHDC3Q96DC8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
ECHDC3Q96DC8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.17■■□□□ 1.14
ECHDC3Q96DC8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ECHDC3Q96DC8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.17■■□□□ 1.14
ECHDC3Q96DC8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
ECHDC3Q96DC8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
ECHDC3Q96DC8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.17■■□□□ 1.14
ECHDC3Q96DC8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.17■■□□□ 1.14
ECHDC3Q96DC8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ECHDC3Q96DC8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
ECHDC3Q96DC8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms