Protein–RNA interactions for Protein: Q96DA2

RAB39B, Ras-related protein Rab-39B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39BQ96DA2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB39BQ96DA2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB39BQ96DA2 C17orf82-201ENST00000623772 1530 ntBASIC18.85■□□□□ 0.61
RAB39BQ96DA2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB39BQ96DA2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB39BQ96DA2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB39BQ96DA2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB39BQ96DA2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB39BQ96DA2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB39BQ96DA2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB39BQ96DA2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB39BQ96DA2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB39BQ96DA2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB39BQ96DA2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB39BQ96DA2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RAB39BQ96DA2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RAB39BQ96DA2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.84■□□□□ 0.61
RAB39BQ96DA2 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.84■□□□□ 0.61
RAB39BQ96DA2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.84■□□□□ 0.61
RAB39BQ96DA2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RAB39BQ96DA2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB39BQ96DA2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
RAB39BQ96DA2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB39BQ96DA2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB39BQ96DA2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
RAB39BQ96DA2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.83■□□□□ 0.61
RAB39BQ96DA2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RAB39BQ96DA2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB39BQ96DA2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.83■□□□□ 0.61
RAB39BQ96DA2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
RAB39BQ96DA2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB39BQ96DA2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB39BQ96DA2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB39BQ96DA2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAB39BQ96DA2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
RAB39BQ96DA2 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.83■□□□□ 0.6
RAB39BQ96DA2 AC011298.3-201ENST00000615796 283 ntBASIC18.83■□□□□ 0.6
RAB39BQ96DA2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB39BQ96DA2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RAB39BQ96DA2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.83■□□□□ 0.6
RAB39BQ96DA2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB39BQ96DA2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.83■□□□□ 0.6
RAB39BQ96DA2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB39BQ96DA2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RAB39BQ96DA2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB39BQ96DA2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB39BQ96DA2 AC009086.3-201ENST00000623486 1008 ntBASIC18.82■□□□□ 0.6
RAB39BQ96DA2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB39BQ96DA2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB39BQ96DA2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB39BQ96DA2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB39BQ96DA2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB39BQ96DA2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB39BQ96DA2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB39BQ96DA2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB39BQ96DA2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB39BQ96DA2 SERBP1P1-201ENST00000396021 1160 ntBASIC18.81■□□□□ 0.6
RAB39BQ96DA2 SUDS3P1-201ENST00000505831 966 ntBASIC18.81■□□□□ 0.6
RAB39BQ96DA2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB39BQ96DA2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB39BQ96DA2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB39BQ96DA2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB39BQ96DA2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB39BQ96DA2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB39BQ96DA2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 MIR4767-201ENST00000582827 78 ntBASIC18.8■□□□□ 0.6
RAB39BQ96DA2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB39BQ96DA2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB39BQ96DA2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB39BQ96DA2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB39BQ96DA2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB39BQ96DA2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RAB39BQ96DA2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB39BQ96DA2 AC004812.2-201ENST00000611079 2094 ntBASIC18.79■□□□□ 0.6
RAB39BQ96DA2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB39BQ96DA2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB39BQ96DA2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB39BQ96DA2 AL031432.3-201ENST00000607698 485 ntBASIC18.79■□□□□ 0.6
RAB39BQ96DA2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB39BQ96DA2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms