Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXRED1Q96CU9 KRT8P33-201ENST00000508125 1423 ntBASIC19.2■□□□□ 0.66
FOXRED1Q96CU9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.2■□□□□ 0.66
FOXRED1Q96CU9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
FOXRED1Q96CU9 RARRES2P1-201ENST00000474487 481 ntBASIC19.2■□□□□ 0.66
FOXRED1Q96CU9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.2■□□□□ 0.66
FOXRED1Q96CU9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXRED1Q96CU9 PVT1_1.1-201ENST00000615125 194 ntBASIC19.2■□□□□ 0.66
FOXRED1Q96CU9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
FOXRED1Q96CU9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXRED1Q96CU9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXRED1Q96CU9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXRED1Q96CU9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXRED1Q96CU9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
FOXRED1Q96CU9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXRED1Q96CU9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXRED1Q96CU9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
FOXRED1Q96CU9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
FOXRED1Q96CU9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXRED1Q96CU9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.19■□□□□ 0.66
FOXRED1Q96CU9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXRED1Q96CU9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXRED1Q96CU9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXRED1Q96CU9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
FOXRED1Q96CU9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXRED1Q96CU9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXRED1Q96CU9 C11orf96-202ENST00000528572 1834 ntBASIC19.18■□□□□ 0.66
FOXRED1Q96CU9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
FOXRED1Q96CU9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
FOXRED1Q96CU9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
FOXRED1Q96CU9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXRED1Q96CU9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
FOXRED1Q96CU9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.18■□□□□ 0.66
FOXRED1Q96CU9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXRED1Q96CU9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.18■□□□□ 0.66
FOXRED1Q96CU9 THA1P-201ENST00000590384 1145 ntBASIC19.18■□□□□ 0.66
FOXRED1Q96CU9 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.18■□□□□ 0.66
FOXRED1Q96CU9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXRED1Q96CU9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXRED1Q96CU9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXRED1Q96CU9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
FOXRED1Q96CU9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXRED1Q96CU9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXRED1Q96CU9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXRED1Q96CU9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
FOXRED1Q96CU9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
FOXRED1Q96CU9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.17■□□□□ 0.66
FOXRED1Q96CU9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXRED1Q96CU9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXRED1Q96CU9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.17■□□□□ 0.66
FOXRED1Q96CU9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXRED1Q96CU9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXRED1Q96CU9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXRED1Q96CU9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXRED1Q96CU9 AC139530.1-201ENST00000575312 1977 ntBASIC19.17■□□□□ 0.66
FOXRED1Q96CU9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
FOXRED1Q96CU9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXRED1Q96CU9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 MIR4281-201ENST00000580852 62 ntBASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXRED1Q96CU9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXRED1Q96CU9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.15■□□□□ 0.66
FOXRED1Q96CU9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.15■□□□□ 0.66
FOXRED1Q96CU9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXRED1Q96CU9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXRED1Q96CU9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXRED1Q96CU9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXRED1Q96CU9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.15■□□□□ 0.66
FOXRED1Q96CU9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
FOXRED1Q96CU9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
FOXRED1Q96CU9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXRED1Q96CU9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXRED1Q96CU9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.15■□□□□ 0.66
FOXRED1Q96CU9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXRED1Q96CU9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.15■□□□□ 0.66
FOXRED1Q96CU9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.15■□□□□ 0.66
FOXRED1Q96CU9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
FOXRED1Q96CU9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
FOXRED1Q96CU9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.14■□□□□ 0.66
FOXRED1Q96CU9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.14■□□□□ 0.66
FOXRED1Q96CU9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms