Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC9.25□□□□□ -0.93
SYNE2Q8WXH0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 AC093787.1-201ENST00000450396 207 ntBASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 AC004263.2-201ENST00000617183 678 ntBASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 MYC-209ENST00000641252 345 ntBASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 MKRN4P-201ENST00000444706 1521 ntBASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 AC090877.2-201ENST00000558441 1738 ntBASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SYNE2Q8WXH0 TSPY15P-201ENST00000457163 923 ntBASIC9.23□□□□□ -0.93
SYNE2Q8WXH0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC9.23□□□□□ -0.93
SYNE2Q8WXH0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SYNE2Q8WXH0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC9.23□□□□□ -0.93
SYNE2Q8WXH0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC9.23□□□□□ -0.93
SYNE2Q8WXH0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
SYNE2Q8WXH0 UBE2DNL-204ENST00000602536 740 ntBASIC9.23□□□□□ -0.93
SYNE2Q8WXH0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC9.23□□□□□ -0.93
SYNE2Q8WXH0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
SYNE2Q8WXH0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC9.23□□□□□ -0.93
SYNE2Q8WXH0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
SYNE2Q8WXH0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC9.23□□□□□ -0.93
SYNE2Q8WXH0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC9.23□□□□□ -0.93
SYNE2Q8WXH0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SYNE2Q8WXH0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC9.23□□□□□ -0.93
SYNE2Q8WXH0 AC009086.3-201ENST00000623486 1008 ntBASIC9.23□□□□□ -0.93
SYNE2Q8WXH0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC9.23□□□□□ -0.93
SYNE2Q8WXH0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SYNE2Q8WXH0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SYNE2Q8WXH0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SYNE2Q8WXH0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 AC026366.1-201ENST00000488803 879 ntBASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 TESC-206ENST00000541210 936 ntTSL 3 BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 AC133552.2-202ENST00000575694 574 ntBASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 BX255925.1-201ENST00000566954 1854 ntBASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC9.22□□□□□ -0.93
SYNE2Q8WXH0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SYNE2Q8WXH0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SYNE2Q8WXH0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
SYNE2Q8WXH0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC9.21□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms