Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 AL136967.2-201ENST00000623968 743 ntBASIC26.22■■□□□ 1.79
STAG1Q8WVM7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
STAG1Q8WVM7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
STAG1Q8WVM7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
STAG1Q8WVM7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.21■■□□□ 1.79
STAG1Q8WVM7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
STAG1Q8WVM7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.21■■□□□ 1.79
STAG1Q8WVM7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
STAG1Q8WVM7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
STAG1Q8WVM7 AC004687.1-201ENST00000579003 1625 ntBASIC26.21■■□□□ 1.79
STAG1Q8WVM7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.2■■□□□ 1.78
STAG1Q8WVM7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.2■■□□□ 1.78
STAG1Q8WVM7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
STAG1Q8WVM7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.2■■□□□ 1.78
STAG1Q8WVM7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.2■■□□□ 1.78
STAG1Q8WVM7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.2■■□□□ 1.78
STAG1Q8WVM7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
STAG1Q8WVM7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
STAG1Q8WVM7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
STAG1Q8WVM7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
STAG1Q8WVM7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.19■■□□□ 1.78
STAG1Q8WVM7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
STAG1Q8WVM7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
STAG1Q8WVM7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
STAG1Q8WVM7 OR2I1P-207ENST00000453522 948 ntBASIC26.19■■□□□ 1.78
STAG1Q8WVM7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
STAG1Q8WVM7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
STAG1Q8WVM7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
STAG1Q8WVM7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.18■■□□□ 1.78
STAG1Q8WVM7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.18■■□□□ 1.78
STAG1Q8WVM7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
STAG1Q8WVM7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
STAG1Q8WVM7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.18■■□□□ 1.78
STAG1Q8WVM7 MIR939-201ENST00000401314 82 ntBASIC26.18■■□□□ 1.78
STAG1Q8WVM7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
STAG1Q8WVM7 AP001330.3-201ENST00000520123 633 ntBASIC26.18■■□□□ 1.78
STAG1Q8WVM7 AF213884.3-201ENST00000563833 479 ntBASIC26.18■■□□□ 1.78
STAG1Q8WVM7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
STAG1Q8WVM7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.18■■□□□ 1.78
STAG1Q8WVM7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
STAG1Q8WVM7 ZNRF2P3-201ENST00000424200 374 ntBASIC26.17■■□□□ 1.78
STAG1Q8WVM7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
STAG1Q8WVM7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
STAG1Q8WVM7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
STAG1Q8WVM7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
STAG1Q8WVM7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.17■■□□□ 1.78
STAG1Q8WVM7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
STAG1Q8WVM7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
STAG1Q8WVM7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.16■■□□□ 1.78
STAG1Q8WVM7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.16■■□□□ 1.78
STAG1Q8WVM7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
STAG1Q8WVM7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
STAG1Q8WVM7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
STAG1Q8WVM7 BX842568.3-201ENST00000418104 571 ntBASIC26.15■■□□□ 1.78
STAG1Q8WVM7 SLC47A1P1-202ENST00000449666 945 ntBASIC26.15■■□□□ 1.78
STAG1Q8WVM7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.15■■□□□ 1.78
STAG1Q8WVM7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.15■■□□□ 1.78
STAG1Q8WVM7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.15■■□□□ 1.78
STAG1Q8WVM7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
STAG1Q8WVM7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
STAG1Q8WVM7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.14■■□□□ 1.78
STAG1Q8WVM7 AC010525.1-201ENST00000585559 441 ntBASIC26.14■■□□□ 1.78
STAG1Q8WVM7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
STAG1Q8WVM7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.14■■□□□ 1.78
STAG1Q8WVM7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
STAG1Q8WVM7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
STAG1Q8WVM7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
STAG1Q8WVM7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.13■■□□□ 1.77
STAG1Q8WVM7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
STAG1Q8WVM7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.13■■□□□ 1.77
STAG1Q8WVM7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.13■■□□□ 1.77
STAG1Q8WVM7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
STAG1Q8WVM7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
STAG1Q8WVM7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
STAG1Q8WVM7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
STAG1Q8WVM7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
STAG1Q8WVM7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
STAG1Q8WVM7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
STAG1Q8WVM7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.12■■□□□ 1.77
STAG1Q8WVM7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.12■■□□□ 1.77
STAG1Q8WVM7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
STAG1Q8WVM7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
STAG1Q8WVM7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
STAG1Q8WVM7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.11■■□□□ 1.77
STAG1Q8WVM7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
STAG1Q8WVM7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
STAG1Q8WVM7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
STAG1Q8WVM7 AC091305.1-201ENST00000479476 895 ntBASIC26.11■■□□□ 1.77
STAG1Q8WVM7 AC027682.1-201ENST00000562846 899 ntBASIC26.11■■□□□ 1.77
STAG1Q8WVM7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.11■■□□□ 1.77
STAG1Q8WVM7 AC233992.3-201ENST00000607491 485 ntBASIC26.11■■□□□ 1.77
STAG1Q8WVM7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
STAG1Q8WVM7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
STAG1Q8WVM7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
STAG1Q8WVM7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.11■■□□□ 1.77
STAG1Q8WVM7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
STAG1Q8WVM7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.1■■□□□ 1.77
STAG1Q8WVM7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
STAG1Q8WVM7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
STAG1Q8WVM7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms