Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCHCR1Q8TD31 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCHCR1Q8TD31 MTDHP2-201ENST00000601468 714 ntBASIC23■■□□□ 1.27
CCHCR1Q8TD31 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23■■□□□ 1.27
CCHCR1Q8TD31 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
CCHCR1Q8TD31 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23■■□□□ 1.27
CCHCR1Q8TD31 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCHCR1Q8TD31 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
CCHCR1Q8TD31 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.99■■□□□ 1.27
CCHCR1Q8TD31 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
CCHCR1Q8TD31 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.99■■□□□ 1.27
CCHCR1Q8TD31 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.99■■□□□ 1.27
CCHCR1Q8TD31 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCHCR1Q8TD31 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCHCR1Q8TD31 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCHCR1Q8TD31 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCHCR1Q8TD31 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCHCR1Q8TD31 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCHCR1Q8TD31 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
CCHCR1Q8TD31 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCHCR1Q8TD31 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCHCR1Q8TD31 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.98■■□□□ 1.27
CCHCR1Q8TD31 AC137767.1-201ENST00000602918 1920 ntBASIC22.98■■□□□ 1.27
CCHCR1Q8TD31 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCHCR1Q8TD31 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
CCHCR1Q8TD31 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCHCR1Q8TD31 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCHCR1Q8TD31 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
CCHCR1Q8TD31 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.98■■□□□ 1.27
CCHCR1Q8TD31 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
CCHCR1Q8TD31 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.98■■□□□ 1.27
CCHCR1Q8TD31 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCHCR1Q8TD31 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCHCR1Q8TD31 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCHCR1Q8TD31 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCHCR1Q8TD31 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.97■■□□□ 1.27
CCHCR1Q8TD31 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
CCHCR1Q8TD31 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CCHCR1Q8TD31 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CCHCR1Q8TD31 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.96■■□□□ 1.27
CCHCR1Q8TD31 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCHCR1Q8TD31 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCHCR1Q8TD31 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.96■■□□□ 1.27
CCHCR1Q8TD31 UNC93B8-201ENST00000511903 705 ntBASIC22.96■■□□□ 1.27
CCHCR1Q8TD31 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.96■■□□□ 1.27
CCHCR1Q8TD31 AC010997.5-201ENST00000609182 354 ntBASIC22.96■■□□□ 1.27
CCHCR1Q8TD31 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.96■■□□□ 1.27
CCHCR1Q8TD31 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCHCR1Q8TD31 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.96■■□□□ 1.27
CCHCR1Q8TD31 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCHCR1Q8TD31 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCHCR1Q8TD31 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCHCR1Q8TD31 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.95■■□□□ 1.27
CCHCR1Q8TD31 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.95■■□□□ 1.26
CCHCR1Q8TD31 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.95■■□□□ 1.26
CCHCR1Q8TD31 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.95■■□□□ 1.26
CCHCR1Q8TD31 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.95■■□□□ 1.26
CCHCR1Q8TD31 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.95■■□□□ 1.26
CCHCR1Q8TD31 MIR6722-201ENST00000617286 78 ntBASIC22.95■■□□□ 1.26
CCHCR1Q8TD31 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
CCHCR1Q8TD31 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
CCHCR1Q8TD31 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.95■■□□□ 1.26
CCHCR1Q8TD31 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCHCR1Q8TD31 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CCHCR1Q8TD31 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCHCR1Q8TD31 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
CCHCR1Q8TD31 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
CCHCR1Q8TD31 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.94■■□□□ 1.26
CCHCR1Q8TD31 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.94■■□□□ 1.26
CCHCR1Q8TD31 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCHCR1Q8TD31 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCHCR1Q8TD31 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCHCR1Q8TD31 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCHCR1Q8TD31 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCHCR1Q8TD31 KRT16P3-201ENST00000439127 1283 ntBASIC22.94■■□□□ 1.26
CCHCR1Q8TD31 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.94■■□□□ 1.26
CCHCR1Q8TD31 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
CCHCR1Q8TD31 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms