Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGCLL1Q8TB92 ECEL1P1-201ENST00000373592 1742 ntBASIC21.8■■□□□ 1.08
HMGCLL1Q8TB92 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGCLL1Q8TB92 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HMGCLL1Q8TB92 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGCLL1Q8TB92 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HMGCLL1Q8TB92 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGCLL1Q8TB92 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGCLL1Q8TB92 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGCLL1Q8TB92 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
HMGCLL1Q8TB92 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGCLL1Q8TB92 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
HMGCLL1Q8TB92 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
HMGCLL1Q8TB92 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HMGCLL1Q8TB92 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HMGCLL1Q8TB92 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
HMGCLL1Q8TB92 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HMGCLL1Q8TB92 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
HMGCLL1Q8TB92 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
HMGCLL1Q8TB92 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.78■■□□□ 1.08
HMGCLL1Q8TB92 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.78■■□□□ 1.08
HMGCLL1Q8TB92 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HMGCLL1Q8TB92 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
HMGCLL1Q8TB92 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMGCLL1Q8TB92 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGCLL1Q8TB92 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.77■■□□□ 1.08
HMGCLL1Q8TB92 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGCLL1Q8TB92 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGCLL1Q8TB92 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
HMGCLL1Q8TB92 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.77■■□□□ 1.08
HMGCLL1Q8TB92 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.77■■□□□ 1.08
HMGCLL1Q8TB92 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGCLL1Q8TB92 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGCLL1Q8TB92 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGCLL1Q8TB92 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.77■■□□□ 1.08
HMGCLL1Q8TB92 MIR4466-201ENST00000606121 54 ntBASIC21.77■■□□□ 1.08
HMGCLL1Q8TB92 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGCLL1Q8TB92 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.77■■□□□ 1.08
HMGCLL1Q8TB92 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HMGCLL1Q8TB92 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
HMGCLL1Q8TB92 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.77■■□□□ 1.08
HMGCLL1Q8TB92 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
HMGCLL1Q8TB92 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
HMGCLL1Q8TB92 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLL1Q8TB92 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.76■■□□□ 1.07
HMGCLL1Q8TB92 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.76■■□□□ 1.07
HMGCLL1Q8TB92 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.76■■□□□ 1.07
HMGCLL1Q8TB92 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLL1Q8TB92 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLL1Q8TB92 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLL1Q8TB92 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLL1Q8TB92 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLL1Q8TB92 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLL1Q8TB92 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
HMGCLL1Q8TB92 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLL1Q8TB92 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.76■■□□□ 1.07
HMGCLL1Q8TB92 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLL1Q8TB92 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGCLL1Q8TB92 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.75■■□□□ 1.07
HMGCLL1Q8TB92 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
HMGCLL1Q8TB92 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HMGCLL1Q8TB92 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HMGCLL1Q8TB92 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HMGCLL1Q8TB92 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMGCLL1Q8TB92 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMGCLL1Q8TB92 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMGCLL1Q8TB92 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMGCLL1Q8TB92 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.75■■□□□ 1.07
HMGCLL1Q8TB92 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMGCLL1Q8TB92 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
HMGCLL1Q8TB92 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMGCLL1Q8TB92 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HMGCLL1Q8TB92 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HMGCLL1Q8TB92 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HMGCLL1Q8TB92 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HMGCLL1Q8TB92 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HMGCLL1Q8TB92 FP325331.1-202ENST00000623531 1380 ntBASIC21.74■■□□□ 1.07
HMGCLL1Q8TB92 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMGCLL1Q8TB92 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
HMGCLL1Q8TB92 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
HMGCLL1Q8TB92 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMGCLL1Q8TB92 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.73■■□□□ 1.07
HMGCLL1Q8TB92 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.73■■□□□ 1.07
HMGCLL1Q8TB92 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.73■■□□□ 1.07
HMGCLL1Q8TB92 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
HMGCLL1Q8TB92 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMGCLL1Q8TB92 AC144652.1-201ENST00000609974 1624 ntBASIC21.73■■□□□ 1.07
HMGCLL1Q8TB92 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.73■■□□□ 1.07
HMGCLL1Q8TB92 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HMGCLL1Q8TB92 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.72■■□□□ 1.07
HMGCLL1Q8TB92 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMGCLL1Q8TB92 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
HMGCLL1Q8TB92 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
HMGCLL1Q8TB92 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.72■■□□□ 1.07
HMGCLL1Q8TB92 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.72■■□□□ 1.07
HMGCLL1Q8TB92 SRD5A1P1-201ENST00000442297 786 ntBASIC21.72■■□□□ 1.07
HMGCLL1Q8TB92 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.72■■□□□ 1.07
HMGCLL1Q8TB92 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.72■■□□□ 1.07
HMGCLL1Q8TB92 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.72■■□□□ 1.07
HMGCLL1Q8TB92 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms