Protein–RNA interactions for Protein: Q8NFY4

SEMA6D, Semaphorin-6D, humanhuman

Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6DQ8NFY4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA6DQ8NFY4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.28■□□□□ 0.68
SEMA6DQ8NFY4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA6DQ8NFY4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA6DQ8NFY4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA6DQ8NFY4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.27■□□□□ 0.68
SEMA6DQ8NFY4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA6DQ8NFY4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.27■□□□□ 0.68
SEMA6DQ8NFY4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SEMA6DQ8NFY4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
SEMA6DQ8NFY4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.27■□□□□ 0.68
SEMA6DQ8NFY4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA6DQ8NFY4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SEMA6DQ8NFY4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.27■□□□□ 0.68
SEMA6DQ8NFY4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA6DQ8NFY4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SEMA6DQ8NFY4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SEMA6DQ8NFY4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
SEMA6DQ8NFY4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SEMA6DQ8NFY4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SEMA6DQ8NFY4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SEMA6DQ8NFY4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SEMA6DQ8NFY4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA6DQ8NFY4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.26■□□□□ 0.67
SEMA6DQ8NFY4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA6DQ8NFY4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA6DQ8NFY4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
SEMA6DQ8NFY4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA6DQ8NFY4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SEMA6DQ8NFY4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.26■□□□□ 0.67
SEMA6DQ8NFY4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.26■□□□□ 0.67
SEMA6DQ8NFY4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.26■□□□□ 0.67
SEMA6DQ8NFY4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA6DQ8NFY4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.26■□□□□ 0.67
SEMA6DQ8NFY4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA6DQ8NFY4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.25■□□□□ 0.67
SEMA6DQ8NFY4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.25■□□□□ 0.67
SEMA6DQ8NFY4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA6DQ8NFY4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA6DQ8NFY4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA6DQ8NFY4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.25■□□□□ 0.67
SEMA6DQ8NFY4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SEMA6DQ8NFY4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA6DQ8NFY4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.25■□□□□ 0.67
SEMA6DQ8NFY4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.25■□□□□ 0.67
SEMA6DQ8NFY4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.25■□□□□ 0.67
SEMA6DQ8NFY4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.25■□□□□ 0.67
SEMA6DQ8NFY4 MTDHP2-201ENST00000601468 714 ntBASIC19.25■□□□□ 0.67
SEMA6DQ8NFY4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA6DQ8NFY4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.25■□□□□ 0.67
SEMA6DQ8NFY4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA6DQ8NFY4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA6DQ8NFY4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA6DQ8NFY4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SEMA6DQ8NFY4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA6DQ8NFY4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA6DQ8NFY4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SEMA6DQ8NFY4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA6DQ8NFY4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA6DQ8NFY4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA6DQ8NFY4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA6DQ8NFY4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SEMA6DQ8NFY4 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.23■□□□□ 0.67
SEMA6DQ8NFY4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA6DQ8NFY4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SEMA6DQ8NFY4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA6DQ8NFY4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA6DQ8NFY4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SEMA6DQ8NFY4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.23■□□□□ 0.67
SEMA6DQ8NFY4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA6DQ8NFY4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.22■□□□□ 0.67
SEMA6DQ8NFY4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
SEMA6DQ8NFY4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA6DQ8NFY4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA6DQ8NFY4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.22■□□□□ 0.67
SEMA6DQ8NFY4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.22■□□□□ 0.67
SEMA6DQ8NFY4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA6DQ8NFY4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA6DQ8NFY4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA6DQ8NFY4 FP325331.1-202ENST00000623531 1380 ntBASIC19.21■□□□□ 0.67
SEMA6DQ8NFY4 ESRRAP2-201ENST00000418437 1549 ntBASIC19.21■□□□□ 0.67
SEMA6DQ8NFY4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA6DQ8NFY4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.21■□□□□ 0.67
SEMA6DQ8NFY4 AL136116.3-201ENST00000402907 1138 ntBASIC19.21■□□□□ 0.67
SEMA6DQ8NFY4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.21■□□□□ 0.67
SEMA6DQ8NFY4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SEMA6DQ8NFY4 LINC01529-204ENST00000636474 1715 ntBASIC19.21■□□□□ 0.67
SEMA6DQ8NFY4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA6DQ8NFY4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SEMA6DQ8NFY4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA6DQ8NFY4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA6DQ8NFY4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.21■□□□□ 0.67
SEMA6DQ8NFY4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA6DQ8NFY4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SEMA6DQ8NFY4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA6DQ8NFY4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA6DQ8NFY4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SEMA6DQ8NFY4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SEMA6DQ8NFY4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.2■□□□□ 0.66
SEMA6DQ8NFY4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms