Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
LPCAT1Q8NF37 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
LPCAT1Q8NF37 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
LPCAT1Q8NF37 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.33■■□□□ 1.17
LPCAT1Q8NF37 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
LPCAT1Q8NF37 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.33■■□□□ 1.16
LPCAT1Q8NF37 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LPCAT1Q8NF37 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LPCAT1Q8NF37 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.32■■□□□ 1.16
LPCAT1Q8NF37 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LPCAT1Q8NF37 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LPCAT1Q8NF37 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.32■■□□□ 1.16
LPCAT1Q8NF37 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.32■■□□□ 1.16
LPCAT1Q8NF37 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
LPCAT1Q8NF37 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LPCAT1Q8NF37 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LPCAT1Q8NF37 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LPCAT1Q8NF37 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LPCAT1Q8NF37 AC133637.1-201ENST00000624115 1537 ntBASIC22.31■■□□□ 1.16
LPCAT1Q8NF37 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
LPCAT1Q8NF37 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
LPCAT1Q8NF37 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
LPCAT1Q8NF37 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LPCAT1Q8NF37 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LPCAT1Q8NF37 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
LPCAT1Q8NF37 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LPCAT1Q8NF37 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
LPCAT1Q8NF37 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
LPCAT1Q8NF37 AL136162.1-201ENST00000607711 1078 ntBASIC22.31■■□□□ 1.16
LPCAT1Q8NF37 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.31■■□□□ 1.16
LPCAT1Q8NF37 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
LPCAT1Q8NF37 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.31■■□□□ 1.16
LPCAT1Q8NF37 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LPCAT1Q8NF37 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.31■■□□□ 1.16
LPCAT1Q8NF37 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.3■■□□□ 1.16
LPCAT1Q8NF37 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.3■■□□□ 1.16
LPCAT1Q8NF37 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LPCAT1Q8NF37 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.3■■□□□ 1.16
LPCAT1Q8NF37 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.3■■□□□ 1.16
LPCAT1Q8NF37 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
LPCAT1Q8NF37 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.3■■□□□ 1.16
LPCAT1Q8NF37 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.3■■□□□ 1.16
LPCAT1Q8NF37 AL138724.1-201ENST00000606771 1088 ntBASIC22.3■■□□□ 1.16
LPCAT1Q8NF37 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
LPCAT1Q8NF37 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LPCAT1Q8NF37 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
LPCAT1Q8NF37 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
LPCAT1Q8NF37 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LPCAT1Q8NF37 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
LPCAT1Q8NF37 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.3■■□□□ 1.16
LPCAT1Q8NF37 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
LPCAT1Q8NF37 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
LPCAT1Q8NF37 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LPCAT1Q8NF37 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LPCAT1Q8NF37 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.29■■□□□ 1.16
LPCAT1Q8NF37 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LPCAT1Q8NF37 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LPCAT1Q8NF37 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
LPCAT1Q8NF37 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LPCAT1Q8NF37 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.29■■□□□ 1.16
LPCAT1Q8NF37 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.28■■□□□ 1.16
LPCAT1Q8NF37 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.28■■□□□ 1.16
LPCAT1Q8NF37 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
LPCAT1Q8NF37 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.28■■□□□ 1.16
LPCAT1Q8NF37 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
LPCAT1Q8NF37 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.28■■□□□ 1.16
LPCAT1Q8NF37 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.28■■□□□ 1.16
LPCAT1Q8NF37 AC024257.2-201ENST00000549699 147 ntBASIC22.28■■□□□ 1.16
LPCAT1Q8NF37 AC011298.3-201ENST00000615796 283 ntBASIC22.28■■□□□ 1.16
LPCAT1Q8NF37 AC110285.6-201ENST00000617652 491 ntBASIC22.28■■□□□ 1.16
LPCAT1Q8NF37 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.28■■□□□ 1.16
LPCAT1Q8NF37 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LPCAT1Q8NF37 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LPCAT1Q8NF37 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
LPCAT1Q8NF37 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LPCAT1Q8NF37 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LPCAT1Q8NF37 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
LPCAT1Q8NF37 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.27■■□□□ 1.16
LPCAT1Q8NF37 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
LPCAT1Q8NF37 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
LPCAT1Q8NF37 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.27■■□□□ 1.16
LPCAT1Q8NF37 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LPCAT1Q8NF37 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LPCAT1Q8NF37 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LPCAT1Q8NF37 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LPCAT1Q8NF37 AC135279.3-201ENST00000610945 1311 ntBASIC22.27■■□□□ 1.16
LPCAT1Q8NF37 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LPCAT1Q8NF37 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
LPCAT1Q8NF37 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LPCAT1Q8NF37 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.26■■□□□ 1.15
LPCAT1Q8NF37 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.26■■□□□ 1.15
LPCAT1Q8NF37 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LPCAT1Q8NF37 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LPCAT1Q8NF37 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LPCAT1Q8NF37 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LPCAT1Q8NF37 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.26■■□□□ 1.15
LPCAT1Q8NF37 PBX2P1-201ENST00000493219 1291 ntBASIC22.26■■□□□ 1.15
LPCAT1Q8NF37 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.26■■□□□ 1.15
LPCAT1Q8NF37 AC136469.2-201ENST00000623944 1028 ntBASIC22.26■■□□□ 1.15
LPCAT1Q8NF37 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms