Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC168Q8NDH2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC168Q8NDH2 AC010501.1-201ENST00000606270 1962 ntBASIC18.74■□□□□ 0.59
CCDC168Q8NDH2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC168Q8NDH2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC168Q8NDH2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC168Q8NDH2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC168Q8NDH2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC168Q8NDH2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.74■□□□□ 0.59
CCDC168Q8NDH2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC168Q8NDH2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC168Q8NDH2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC168Q8NDH2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CCDC168Q8NDH2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
CCDC168Q8NDH2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC168Q8NDH2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC168Q8NDH2 RPS2P52-201ENST00000469610 820 ntBASIC18.73■□□□□ 0.59
CCDC168Q8NDH2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC168Q8NDH2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CCDC168Q8NDH2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC168Q8NDH2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC168Q8NDH2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC168Q8NDH2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC168Q8NDH2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC168Q8NDH2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC168Q8NDH2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC168Q8NDH2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CCDC168Q8NDH2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC168Q8NDH2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC168Q8NDH2 AC098590.1-201ENST00000468126 897 ntBASIC18.72■□□□□ 0.59
CCDC168Q8NDH2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC168Q8NDH2 AL121832.2-201ENST00000610979 668 ntBASIC18.72■□□□□ 0.59
CCDC168Q8NDH2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CCDC168Q8NDH2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC168Q8NDH2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC168Q8NDH2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CCDC168Q8NDH2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CCDC168Q8NDH2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC168Q8NDH2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC168Q8NDH2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC168Q8NDH2 CNN2P6-201ENST00000439038 900 ntBASIC18.71■□□□□ 0.59
CCDC168Q8NDH2 RNA5SP413-201ENST00000516373 109 ntBASIC18.71■□□□□ 0.59
CCDC168Q8NDH2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC168Q8NDH2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CCDC168Q8NDH2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC168Q8NDH2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC168Q8NDH2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.71■□□□□ 0.58
CCDC168Q8NDH2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.71■□□□□ 0.58
CCDC168Q8NDH2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC168Q8NDH2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC168Q8NDH2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CCDC168Q8NDH2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CCDC168Q8NDH2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC168Q8NDH2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC168Q8NDH2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC168Q8NDH2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CCDC168Q8NDH2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC168Q8NDH2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC168Q8NDH2 SMUG1P1-201ENST00000590640 811 ntBASIC18.7■□□□□ 0.58
CCDC168Q8NDH2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CCDC168Q8NDH2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC168Q8NDH2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC168Q8NDH2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC168Q8NDH2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC168Q8NDH2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC168Q8NDH2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.69■□□□□ 0.58
CCDC168Q8NDH2 SLC7A5P1-201ENST00000568957 537 ntBASIC18.69■□□□□ 0.58
CCDC168Q8NDH2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC168Q8NDH2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC168Q8NDH2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC168Q8NDH2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC168Q8NDH2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCDC168Q8NDH2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC168Q8NDH2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC168Q8NDH2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC168Q8NDH2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC168Q8NDH2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.68■□□□□ 0.58
CCDC168Q8NDH2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC168Q8NDH2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC168Q8NDH2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.68■□□□□ 0.58
CCDC168Q8NDH2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC168Q8NDH2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC168Q8NDH2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC168Q8NDH2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC168Q8NDH2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC168Q8NDH2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC168Q8NDH2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC168Q8NDH2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC168Q8NDH2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC168Q8NDH2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC168Q8NDH2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
CCDC168Q8NDH2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CCDC168Q8NDH2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC168Q8NDH2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC168Q8NDH2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC168Q8NDH2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC168Q8NDH2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC168Q8NDH2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC168Q8NDH2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC168Q8NDH2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms