Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.58■□□□□ 0.88
CDRT4Q8N9R6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.58■□□□□ 0.88
CDRT4Q8N9R6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDRT4Q8N9R6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CDRT4Q8N9R6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.57■□□□□ 0.88
CDRT4Q8N9R6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDRT4Q8N9R6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDRT4Q8N9R6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.57■□□□□ 0.88
CDRT4Q8N9R6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDRT4Q8N9R6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.57■□□□□ 0.88
CDRT4Q8N9R6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.57■□□□□ 0.88
CDRT4Q8N9R6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.57■□□□□ 0.88
CDRT4Q8N9R6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.57■□□□□ 0.88
CDRT4Q8N9R6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDRT4Q8N9R6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDRT4Q8N9R6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDRT4Q8N9R6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDRT4Q8N9R6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CDRT4Q8N9R6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDRT4Q8N9R6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDRT4Q8N9R6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDRT4Q8N9R6 AC233723.2-201ENST00000623798 2106 ntBASIC20.56■□□□□ 0.88
CDRT4Q8N9R6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDRT4Q8N9R6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDRT4Q8N9R6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.56■□□□□ 0.88
CDRT4Q8N9R6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDRT4Q8N9R6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDRT4Q8N9R6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.56■□□□□ 0.88
CDRT4Q8N9R6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.56■□□□□ 0.88
CDRT4Q8N9R6 AC092171.4-201ENST00000609130 632 ntBASIC20.56■□□□□ 0.88
CDRT4Q8N9R6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.56■□□□□ 0.88
CDRT4Q8N9R6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDRT4Q8N9R6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.56■□□□□ 0.88
CDRT4Q8N9R6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.56■□□□□ 0.88
CDRT4Q8N9R6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDRT4Q8N9R6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDRT4Q8N9R6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.56■□□□□ 0.88
CDRT4Q8N9R6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
CDRT4Q8N9R6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
CDRT4Q8N9R6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDRT4Q8N9R6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.55■□□□□ 0.88
CDRT4Q8N9R6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDRT4Q8N9R6 AC099791.2-201ENST00000605725 427 ntBASIC20.55■□□□□ 0.88
CDRT4Q8N9R6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDRT4Q8N9R6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CDRT4Q8N9R6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDRT4Q8N9R6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDRT4Q8N9R6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDRT4Q8N9R6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDRT4Q8N9R6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CDRT4Q8N9R6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDRT4Q8N9R6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.54■□□□□ 0.88
CDRT4Q8N9R6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.54■□□□□ 0.88
CDRT4Q8N9R6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.54■□□□□ 0.88
CDRT4Q8N9R6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDRT4Q8N9R6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDRT4Q8N9R6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CDRT4Q8N9R6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.54■□□□□ 0.88
CDRT4Q8N9R6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.54■□□□□ 0.88
CDRT4Q8N9R6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CDRT4Q8N9R6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.53■□□□□ 0.88
CDRT4Q8N9R6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDRT4Q8N9R6 AC004687.1-201ENST00000579003 1625 ntBASIC20.53■□□□□ 0.88
CDRT4Q8N9R6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDRT4Q8N9R6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.53■□□□□ 0.88
CDRT4Q8N9R6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.53■□□□□ 0.88
CDRT4Q8N9R6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDRT4Q8N9R6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.53■□□□□ 0.88
CDRT4Q8N9R6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CDRT4Q8N9R6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDRT4Q8N9R6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDRT4Q8N9R6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.53■□□□□ 0.88
CDRT4Q8N9R6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDRT4Q8N9R6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDRT4Q8N9R6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDRT4Q8N9R6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.52■□□□□ 0.88
CDRT4Q8N9R6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDRT4Q8N9R6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDRT4Q8N9R6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDRT4Q8N9R6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CDRT4Q8N9R6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CDRT4Q8N9R6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDRT4Q8N9R6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CDRT4Q8N9R6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.52■□□□□ 0.88
CDRT4Q8N9R6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDRT4Q8N9R6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDRT4Q8N9R6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDRT4Q8N9R6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDRT4Q8N9R6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDRT4Q8N9R6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDRT4Q8N9R6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDRT4Q8N9R6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDRT4Q8N9R6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDRT4Q8N9R6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.52■□□□□ 0.87
CDRT4Q8N9R6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CDRT4Q8N9R6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDRT4Q8N9R6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CDRT4Q8N9R6 AC006455.2-201ENST00000429931 906 ntBASIC20.51■□□□□ 0.87
CDRT4Q8N9R6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDRT4Q8N9R6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms