Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
C3orf56Q8N813 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.34■□□□□ 0.37
C3orf56Q8N813 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
C3orf56Q8N813 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
C3orf56Q8N813 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C3orf56Q8N813 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.34■□□□□ 0.37
C3orf56Q8N813 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.34■□□□□ 0.37
C3orf56Q8N813 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.34■□□□□ 0.37
C3orf56Q8N813 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C3orf56Q8N813 AL121832.2-201ENST00000610979 668 ntBASIC17.34■□□□□ 0.37
C3orf56Q8N813 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.34■□□□□ 0.37
C3orf56Q8N813 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C3orf56Q8N813 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
C3orf56Q8N813 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.33■□□□□ 0.37
C3orf56Q8N813 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
C3orf56Q8N813 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.33■□□□□ 0.37
C3orf56Q8N813 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C3orf56Q8N813 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C3orf56Q8N813 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C3orf56Q8N813 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.33■□□□□ 0.36
C3orf56Q8N813 AC093827.2-201ENST00000512654 315 ntBASIC17.33■□□□□ 0.36
C3orf56Q8N813 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.33■□□□□ 0.36
C3orf56Q8N813 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.33■□□□□ 0.36
C3orf56Q8N813 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C3orf56Q8N813 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C3orf56Q8N813 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC17.33■□□□□ 0.36
C3orf56Q8N813 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.33■□□□□ 0.36
C3orf56Q8N813 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
C3orf56Q8N813 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
C3orf56Q8N813 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
C3orf56Q8N813 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
C3orf56Q8N813 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.32■□□□□ 0.36
C3orf56Q8N813 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
C3orf56Q8N813 TPRG1LP1-201ENST00000598702 760 ntBASIC17.32■□□□□ 0.36
C3orf56Q8N813 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C3orf56Q8N813 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
C3orf56Q8N813 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
C3orf56Q8N813 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
C3orf56Q8N813 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C3orf56Q8N813 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
C3orf56Q8N813 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
C3orf56Q8N813 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.31■□□□□ 0.36
C3orf56Q8N813 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C3orf56Q8N813 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
C3orf56Q8N813 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C3orf56Q8N813 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC17.31■□□□□ 0.36
C3orf56Q8N813 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.31■□□□□ 0.36
C3orf56Q8N813 AC142086.2-201ENST00000569753 217 ntBASIC17.31■□□□□ 0.36
C3orf56Q8N813 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.31■□□□□ 0.36
C3orf56Q8N813 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.31■□□□□ 0.36
C3orf56Q8N813 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
C3orf56Q8N813 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
C3orf56Q8N813 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C3orf56Q8N813 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C3orf56Q8N813 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C3orf56Q8N813 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C3orf56Q8N813 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
C3orf56Q8N813 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C3orf56Q8N813 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C3orf56Q8N813 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C3orf56Q8N813 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C3orf56Q8N813 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C3orf56Q8N813 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
C3orf56Q8N813 SLC29A4P1-201ENST00000398760 971 ntBASIC17.3■□□□□ 0.36
C3orf56Q8N813 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.3■□□□□ 0.36
C3orf56Q8N813 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.3■□□□□ 0.36
C3orf56Q8N813 AC083906.2-201ENST00000511578 360 ntBASIC17.3■□□□□ 0.36
C3orf56Q8N813 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C3orf56Q8N813 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
C3orf56Q8N813 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.3■□□□□ 0.36
C3orf56Q8N813 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C3orf56Q8N813 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.3■□□□□ 0.36
C3orf56Q8N813 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.3■□□□□ 0.36
C3orf56Q8N813 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.3■□□□□ 0.36
C3orf56Q8N813 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
C3orf56Q8N813 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
C3orf56Q8N813 FP325331.1-202ENST00000623531 1380 ntBASIC17.29■□□□□ 0.36
C3orf56Q8N813 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
C3orf56Q8N813 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.29■□□□□ 0.36
C3orf56Q8N813 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C3orf56Q8N813 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C3orf56Q8N813 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.29■□□□□ 0.36
C3orf56Q8N813 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.29■□□□□ 0.36
C3orf56Q8N813 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.29■□□□□ 0.36
C3orf56Q8N813 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.29■□□□□ 0.36
C3orf56Q8N813 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C3orf56Q8N813 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C3orf56Q8N813 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.29■□□□□ 0.36
C3orf56Q8N813 BX005040.4-201ENST00000637145 1518 ntBASIC17.29■□□□□ 0.36
C3orf56Q8N813 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C3orf56Q8N813 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C3orf56Q8N813 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C3orf56Q8N813 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
C3orf56Q8N813 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
C3orf56Q8N813 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C3orf56Q8N813 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.28■□□□□ 0.36
C3orf56Q8N813 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.28■□□□□ 0.36
C3orf56Q8N813 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C3orf56Q8N813 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C3orf56Q8N813 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms