Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CCNYL1Q8N7R7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCNYL1Q8N7R7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.82■■□□□ 1.08
CCNYL1Q8N7R7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCNYL1Q8N7R7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNYL1Q8N7R7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNYL1Q8N7R7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
CCNYL1Q8N7R7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.81■■□□□ 1.08
CCNYL1Q8N7R7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCNYL1Q8N7R7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNYL1Q8N7R7 AC103834.1-201ENST00000520383 144 ntBASIC21.81■■□□□ 1.08
CCNYL1Q8N7R7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.81■■□□□ 1.08
CCNYL1Q8N7R7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNYL1Q8N7R7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
CCNYL1Q8N7R7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNYL1Q8N7R7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.8■■□□□ 1.08
CCNYL1Q8N7R7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCNYL1Q8N7R7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNYL1Q8N7R7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNYL1Q8N7R7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNYL1Q8N7R7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCNYL1Q8N7R7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCNYL1Q8N7R7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNYL1Q8N7R7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
CCNYL1Q8N7R7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.8■■□□□ 1.08
CCNYL1Q8N7R7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CCNYL1Q8N7R7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CCNYL1Q8N7R7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNYL1Q8N7R7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNYL1Q8N7R7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNYL1Q8N7R7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNYL1Q8N7R7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.79■■□□□ 1.08
CCNYL1Q8N7R7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCNYL1Q8N7R7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNYL1Q8N7R7 YBX1P4-201ENST00000392794 808 ntBASIC21.79■■□□□ 1.08
CCNYL1Q8N7R7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.79■■□□□ 1.08
CCNYL1Q8N7R7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.79■■□□□ 1.08
CCNYL1Q8N7R7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.79■■□□□ 1.08
CCNYL1Q8N7R7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.79■■□□□ 1.08
CCNYL1Q8N7R7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.79■■□□□ 1.08
CCNYL1Q8N7R7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CCNYL1Q8N7R7 AC144652.1-201ENST00000609974 1624 ntBASIC21.79■■□□□ 1.08
CCNYL1Q8N7R7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNYL1Q8N7R7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
CCNYL1Q8N7R7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCNYL1Q8N7R7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNYL1Q8N7R7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNYL1Q8N7R7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNYL1Q8N7R7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNYL1Q8N7R7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.78■■□□□ 1.08
CCNYL1Q8N7R7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CCNYL1Q8N7R7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNYL1Q8N7R7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCNYL1Q8N7R7 AC103724.3-201ENST00000564481 992 ntBASIC21.78■■□□□ 1.08
CCNYL1Q8N7R7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.78■■□□□ 1.08
CCNYL1Q8N7R7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.78■■□□□ 1.08
CCNYL1Q8N7R7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNYL1Q8N7R7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCNYL1Q8N7R7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCNYL1Q8N7R7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNYL1Q8N7R7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNYL1Q8N7R7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNYL1Q8N7R7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
CCNYL1Q8N7R7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.77■■□□□ 1.08
CCNYL1Q8N7R7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNYL1Q8N7R7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNYL1Q8N7R7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNYL1Q8N7R7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.77■■□□□ 1.08
CCNYL1Q8N7R7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNYL1Q8N7R7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNYL1Q8N7R7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CCNYL1Q8N7R7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCNYL1Q8N7R7 AC137767.1-201ENST00000602918 1920 ntBASIC21.76■■□□□ 1.07
CCNYL1Q8N7R7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNYL1Q8N7R7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.76■■□□□ 1.07
CCNYL1Q8N7R7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNYL1Q8N7R7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNYL1Q8N7R7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNYL1Q8N7R7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCNYL1Q8N7R7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CCNYL1Q8N7R7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCNYL1Q8N7R7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNYL1Q8N7R7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNYL1Q8N7R7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CCNYL1Q8N7R7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCNYL1Q8N7R7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNYL1Q8N7R7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNYL1Q8N7R7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.75■■□□□ 1.07
CCNYL1Q8N7R7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCNYL1Q8N7R7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNYL1Q8N7R7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.75■■□□□ 1.07
CCNYL1Q8N7R7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNYL1Q8N7R7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
CCNYL1Q8N7R7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNYL1Q8N7R7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCNYL1Q8N7R7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CCNYL1Q8N7R7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCNYL1Q8N7R7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.74■■□□□ 1.07
CCNYL1Q8N7R7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
CCNYL1Q8N7R7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms