Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.9■■□□□ 1.26
SLC44A3Q8N4M1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SLC44A3Q8N4M1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SLC44A3Q8N4M1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.9■■□□□ 1.26
SLC44A3Q8N4M1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.9■■□□□ 1.26
SLC44A3Q8N4M1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.9■■□□□ 1.26
SLC44A3Q8N4M1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SLC44A3Q8N4M1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
SLC44A3Q8N4M1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.9■■□□□ 1.26
SLC44A3Q8N4M1 LINC01529-204ENST00000636474 1715 ntBASIC22.9■■□□□ 1.26
SLC44A3Q8N4M1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SLC44A3Q8N4M1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
SLC44A3Q8N4M1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
SLC44A3Q8N4M1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SLC44A3Q8N4M1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SLC44A3Q8N4M1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.89■■□□□ 1.25
SLC44A3Q8N4M1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SLC44A3Q8N4M1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.89■■□□□ 1.25
SLC44A3Q8N4M1 BID-214ENST00000617586 542 ntTSL 5 BASIC22.89■■□□□ 1.25
SLC44A3Q8N4M1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
SLC44A3Q8N4M1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SLC44A3Q8N4M1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.89■■□□□ 1.25
SLC44A3Q8N4M1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.88■■□□□ 1.25
SLC44A3Q8N4M1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SLC44A3Q8N4M1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SLC44A3Q8N4M1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SLC44A3Q8N4M1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.88■■□□□ 1.25
SLC44A3Q8N4M1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SLC44A3Q8N4M1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
SLC44A3Q8N4M1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SLC44A3Q8N4M1 AC004854.2-201ENST00000608450 1441 ntBASIC22.88■■□□□ 1.25
SLC44A3Q8N4M1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SLC44A3Q8N4M1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
SLC44A3Q8N4M1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SLC44A3Q8N4M1 ABHD17AP1-201ENST00000358206 933 ntBASIC22.87■■□□□ 1.25
SLC44A3Q8N4M1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SLC44A3Q8N4M1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SLC44A3Q8N4M1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SLC44A3Q8N4M1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SLC44A3Q8N4M1 AC135731.1-201ENST00000569415 2548 ntBASIC22.86■■□□□ 1.25
SLC44A3Q8N4M1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
SLC44A3Q8N4M1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.86■■□□□ 1.25
SLC44A3Q8N4M1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.86■■□□□ 1.25
SLC44A3Q8N4M1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SLC44A3Q8N4M1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.86■■□□□ 1.25
SLC44A3Q8N4M1 CROCCP5-201ENST00000436658 830 ntBASIC22.86■■□□□ 1.25
SLC44A3Q8N4M1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SLC44A3Q8N4M1 AC144652.1-201ENST00000609974 1624 ntBASIC22.86■■□□□ 1.25
SLC44A3Q8N4M1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SLC44A3Q8N4M1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
SLC44A3Q8N4M1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SLC44A3Q8N4M1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SLC44A3Q8N4M1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.85■■□□□ 1.25
SLC44A3Q8N4M1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
SLC44A3Q8N4M1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.85■■□□□ 1.25
SLC44A3Q8N4M1 AC006970.2-201ENST00000450065 779 ntBASIC22.85■■□□□ 1.25
SLC44A3Q8N4M1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.85■■□□□ 1.25
SLC44A3Q8N4M1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.85■■□□□ 1.25
SLC44A3Q8N4M1 AL109923.1-201ENST00000618799 583 ntBASIC22.85■■□□□ 1.25
SLC44A3Q8N4M1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
SLC44A3Q8N4M1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC44A3Q8N4M1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC44A3Q8N4M1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SLC44A3Q8N4M1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SLC44A3Q8N4M1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.84■■□□□ 1.25
SLC44A3Q8N4M1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC44A3Q8N4M1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.83■■□□□ 1.25
SLC44A3Q8N4M1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
SLC44A3Q8N4M1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SLC44A3Q8N4M1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SLC44A3Q8N4M1 AL355802.2-201ENST00000402069 882 ntBASIC22.83■■□□□ 1.25
SLC44A3Q8N4M1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SLC44A3Q8N4M1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SLC44A3Q8N4M1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SLC44A3Q8N4M1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
SLC44A3Q8N4M1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.24
SLC44A3Q8N4M1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC44A3Q8N4M1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SLC44A3Q8N4M1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
SLC44A3Q8N4M1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC44A3Q8N4M1 NCF1B-203ENST00000435988 1254 ntBASIC22.82■■□□□ 1.24
SLC44A3Q8N4M1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.82■■□□□ 1.24
SLC44A3Q8N4M1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.82■■□□□ 1.24
SLC44A3Q8N4M1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.82■■□□□ 1.24
SLC44A3Q8N4M1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SLC44A3Q8N4M1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SLC44A3Q8N4M1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SLC44A3Q8N4M1 BX005040.4-201ENST00000637145 1518 ntBASIC22.82■■□□□ 1.24
SLC44A3Q8N4M1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC44A3Q8N4M1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
SLC44A3Q8N4M1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
SLC44A3Q8N4M1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
SLC44A3Q8N4M1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.81■■□□□ 1.24
SLC44A3Q8N4M1 KRT19P1-201ENST00000405746 1186 ntBASIC22.81■■□□□ 1.24
SLC44A3Q8N4M1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC22.81■■□□□ 1.24
SLC44A3Q8N4M1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.81■■□□□ 1.24
SLC44A3Q8N4M1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.81■■□□□ 1.24
SLC44A3Q8N4M1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SLC44A3Q8N4M1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
SLC44A3Q8N4M1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms