Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC116Q8IYX3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC116Q8IYX3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC116Q8IYX3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC116Q8IYX3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.83■□□□□ 0.93
CCDC116Q8IYX3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.83■□□□□ 0.93
CCDC116Q8IYX3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC116Q8IYX3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC116Q8IYX3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC116Q8IYX3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC116Q8IYX3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.83■□□□□ 0.92
CCDC116Q8IYX3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CCDC116Q8IYX3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC116Q8IYX3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC116Q8IYX3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC116Q8IYX3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC116Q8IYX3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC116Q8IYX3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CCDC116Q8IYX3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.82■□□□□ 0.92
CCDC116Q8IYX3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.82■□□□□ 0.92
CCDC116Q8IYX3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC116Q8IYX3 AL512631.2-201ENST00000604634 923 ntBASIC20.82■□□□□ 0.92
CCDC116Q8IYX3 AC009086.3-201ENST00000623486 1008 ntBASIC20.82■□□□□ 0.92
CCDC116Q8IYX3 AC241377.3-202ENST00000626088 1088 ntBASIC20.82■□□□□ 0.92
CCDC116Q8IYX3 AC241585.3-202ENST00000628937 1088 ntBASIC20.82■□□□□ 0.92
CCDC116Q8IYX3 AC245100.8-202ENST00000629247 1058 ntBASIC20.82■□□□□ 0.92
CCDC116Q8IYX3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC116Q8IYX3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC116Q8IYX3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC116Q8IYX3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCDC116Q8IYX3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC116Q8IYX3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC116Q8IYX3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC116Q8IYX3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC116Q8IYX3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC116Q8IYX3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC116Q8IYX3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC116Q8IYX3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC116Q8IYX3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC116Q8IYX3 AC099791.2-201ENST00000605725 427 ntBASIC20.81■□□□□ 0.92
CCDC116Q8IYX3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CCDC116Q8IYX3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC116Q8IYX3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC116Q8IYX3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC116Q8IYX3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC116Q8IYX3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC116Q8IYX3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC116Q8IYX3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCDC116Q8IYX3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CCDC116Q8IYX3 AC004687.1-201ENST00000579003 1625 ntBASIC20.79■□□□□ 0.92
CCDC116Q8IYX3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC116Q8IYX3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC116Q8IYX3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC116Q8IYX3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC116Q8IYX3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CCDC116Q8IYX3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC116Q8IYX3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC116Q8IYX3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CCDC116Q8IYX3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC116Q8IYX3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC116Q8IYX3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC116Q8IYX3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC116Q8IYX3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC116Q8IYX3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC116Q8IYX3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC116Q8IYX3 AC006455.2-201ENST00000429931 906 ntBASIC20.78■□□□□ 0.92
CCDC116Q8IYX3 SRD5A1P1-201ENST00000442297 786 ntBASIC20.78■□□□□ 0.92
CCDC116Q8IYX3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC116Q8IYX3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC116Q8IYX3 MIR4466-201ENST00000606121 54 ntBASIC20.78■□□□□ 0.92
CCDC116Q8IYX3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC116Q8IYX3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC116Q8IYX3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC116Q8IYX3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
CCDC116Q8IYX3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC116Q8IYX3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC116Q8IYX3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC116Q8IYX3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CCDC116Q8IYX3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms