Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RP1L1Q8IWN7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.07■□□□□ 0.8
RP1L1Q8IWN7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RP1L1Q8IWN7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RP1L1Q8IWN7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.07■□□□□ 0.8
RP1L1Q8IWN7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.07■□□□□ 0.8
RP1L1Q8IWN7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RP1L1Q8IWN7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RP1L1Q8IWN7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RP1L1Q8IWN7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RP1L1Q8IWN7 MIR663A-201ENST00000385250 93 ntBASIC20.06■□□□□ 0.8
RP1L1Q8IWN7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.06■□□□□ 0.8
RP1L1Q8IWN7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RP1L1Q8IWN7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
RP1L1Q8IWN7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RP1L1Q8IWN7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RP1L1Q8IWN7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.06■□□□□ 0.8
RP1L1Q8IWN7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
RP1L1Q8IWN7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RP1L1Q8IWN7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.05■□□□□ 0.8
RP1L1Q8IWN7 GPX1P1-201ENST00000388829 606 ntBASIC20.05■□□□□ 0.8
RP1L1Q8IWN7 TSPY20P-201ENST00000450910 630 ntBASIC20.05■□□□□ 0.8
RP1L1Q8IWN7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.05■□□□□ 0.8
RP1L1Q8IWN7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RP1L1Q8IWN7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.05■□□□□ 0.8
RP1L1Q8IWN7 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.05■□□□□ 0.8
RP1L1Q8IWN7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RP1L1Q8IWN7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RP1L1Q8IWN7 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.05■□□□□ 0.8
RP1L1Q8IWN7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.05■□□□□ 0.8
RP1L1Q8IWN7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RP1L1Q8IWN7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RP1L1Q8IWN7 HLA-L-211ENST00000482052 1765 ntBASIC20.05■□□□□ 0.8
RP1L1Q8IWN7 TPRG1LP1-201ENST00000598702 760 ntBASIC20.04■□□□□ 0.8
RP1L1Q8IWN7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.04■□□□□ 0.8
RP1L1Q8IWN7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RP1L1Q8IWN7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RP1L1Q8IWN7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RP1L1Q8IWN7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
RP1L1Q8IWN7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RP1L1Q8IWN7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RP1L1Q8IWN7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.04■□□□□ 0.8
RP1L1Q8IWN7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RP1L1Q8IWN7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.04■□□□□ 0.8
RP1L1Q8IWN7 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.04■□□□□ 0.8
RP1L1Q8IWN7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.04■□□□□ 0.8
RP1L1Q8IWN7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RP1L1Q8IWN7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RP1L1Q8IWN7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 KRT18P11-201ENST00000435214 1283 ntBASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 DUSP8P4-201ENST00000399538 1761 ntBASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 AL355802.2-201ENST00000402069 882 ntBASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 AC010525.1-201ENST00000585559 441 ntBASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 ALDH1A3-203ENST00000557963 1670 ntBASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RP1L1Q8IWN7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.02■□□□□ 0.8
RP1L1Q8IWN7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RP1L1Q8IWN7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RP1L1Q8IWN7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RP1L1Q8IWN7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RP1L1Q8IWN7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RP1L1Q8IWN7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.02■□□□□ 0.8
RP1L1Q8IWN7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.02■□□□□ 0.8
RP1L1Q8IWN7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.02■□□□□ 0.8
RP1L1Q8IWN7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
RP1L1Q8IWN7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
RP1L1Q8IWN7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RP1L1Q8IWN7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RP1L1Q8IWN7 TMEM191A-211ENST00000637163 1067 ntBASIC20.01■□□□□ 0.79
RP1L1Q8IWN7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.01■□□□□ 0.79
RP1L1Q8IWN7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RP1L1Q8IWN7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RP1L1Q8IWN7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RP1L1Q8IWN7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.01■□□□□ 0.79
RP1L1Q8IWN7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.01■□□□□ 0.79
RP1L1Q8IWN7 BID-214ENST00000617586 542 ntTSL 5 BASIC20.01■□□□□ 0.79
RP1L1Q8IWN7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.01■□□□□ 0.79
RP1L1Q8IWN7 AC073111.5-205ENST00000641717 521 ntBASIC20.01■□□□□ 0.79
RP1L1Q8IWN7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RP1L1Q8IWN7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RP1L1Q8IWN7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RP1L1Q8IWN7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20■□□□□ 0.79
RP1L1Q8IWN7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20■□□□□ 0.79
RP1L1Q8IWN7 AL161729.1-201ENST00000604104 1402 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms