Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.46■□□□□ 0.71
LYSMD2Q8IV50 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD2Q8IV50 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD2Q8IV50 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD2Q8IV50 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LYSMD2Q8IV50 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LYSMD2Q8IV50 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD2Q8IV50 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.45■□□□□ 0.7
LYSMD2Q8IV50 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD2Q8IV50 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.45■□□□□ 0.7
LYSMD2Q8IV50 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD2Q8IV50 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD2Q8IV50 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD2Q8IV50 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD2Q8IV50 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.44■□□□□ 0.7
LYSMD2Q8IV50 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
LYSMD2Q8IV50 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD2Q8IV50 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LYSMD2Q8IV50 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD2Q8IV50 RPS2P35-201ENST00000443417 897 ntBASIC19.44■□□□□ 0.7
LYSMD2Q8IV50 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.44■□□□□ 0.7
LYSMD2Q8IV50 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD2Q8IV50 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.44■□□□□ 0.7
LYSMD2Q8IV50 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
LYSMD2Q8IV50 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD2Q8IV50 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
LYSMD2Q8IV50 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD2Q8IV50 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LYSMD2Q8IV50 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD2Q8IV50 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD2Q8IV50 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.43■□□□□ 0.7
LYSMD2Q8IV50 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD2Q8IV50 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.43■□□□□ 0.7
LYSMD2Q8IV50 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.43■□□□□ 0.7
LYSMD2Q8IV50 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD2Q8IV50 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD2Q8IV50 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD2Q8IV50 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD2Q8IV50 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
LYSMD2Q8IV50 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD2Q8IV50 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD2Q8IV50 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD2Q8IV50 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD2Q8IV50 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD2Q8IV50 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.43■□□□□ 0.7
LYSMD2Q8IV50 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD2Q8IV50 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD2Q8IV50 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD2Q8IV50 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD2Q8IV50 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD2Q8IV50 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD2Q8IV50 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD2Q8IV50 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD2Q8IV50 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD2Q8IV50 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.42■□□□□ 0.7
LYSMD2Q8IV50 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD2Q8IV50 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD2Q8IV50 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LYSMD2Q8IV50 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.41■□□□□ 0.7
LYSMD2Q8IV50 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD2Q8IV50 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.41■□□□□ 0.7
LYSMD2Q8IV50 AF106564.1-201ENST00000607058 2553 ntBASIC19.41■□□□□ 0.7
LYSMD2Q8IV50 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD2Q8IV50 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.4■□□□□ 0.7
LYSMD2Q8IV50 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD2Q8IV50 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD2Q8IV50 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LYSMD2Q8IV50 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD2Q8IV50 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD2Q8IV50 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD2Q8IV50 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.4■□□□□ 0.7
LYSMD2Q8IV50 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.4■□□□□ 0.7
LYSMD2Q8IV50 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
LYSMD2Q8IV50 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD2Q8IV50 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD2Q8IV50 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD2Q8IV50 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD2Q8IV50 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSMD2Q8IV50 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.4■□□□□ 0.7
LYSMD2Q8IV50 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
LYSMD2Q8IV50 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.39■□□□□ 0.7
LYSMD2Q8IV50 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
LYSMD2Q8IV50 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD2Q8IV50 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
LYSMD2Q8IV50 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.39■□□□□ 0.69
LYSMD2Q8IV50 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.39■□□□□ 0.69
LYSMD2Q8IV50 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.39■□□□□ 0.69
LYSMD2Q8IV50 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD2Q8IV50 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD2Q8IV50 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD2Q8IV50 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD2Q8IV50 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LYSMD2Q8IV50 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LYSMD2Q8IV50 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LYSMD2Q8IV50 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.38■□□□□ 0.69
LYSMD2Q8IV50 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.38■□□□□ 0.69
LYSMD2Q8IV50 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.38■□□□□ 0.69
LYSMD2Q8IV50 AC060814.1-201ENST00000554326 538 ntBASIC19.38■□□□□ 0.69
LYSMD2Q8IV50 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.38■□□□□ 0.69
LYSMD2Q8IV50 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms